Xenopus tropicalis (tropical clawed frog): 100126221
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Entry
100126221 CDS
T01011
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 6
KO
K26585
methyl-CpG-binding domain protein 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100126221 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100126221 (mbd6)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
100126221 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
100126221
NCBI-ProteinID:
NP_001119549
Xenbase:
XB-GENE-1000625
UniProt:
B2GU95
LinkDB
All DBs
Position
2:140587322..140640682
Genome browser
AA seq
1365 aa
AA seq
DB search
MNGGSESGGGDSYGGPPTVQVPIGWQRRMEPGMVVYISPSGTVLTSMDQLRAYLVTDGTC
KCGLECPLNIYKVFNFDPRAVVKRRSAEDVKAEEDMTKLCNHRRKIVALATLYKSIESTP
LALQNQAAGCSPSQNFHGASTSPKMGQHHCSLDPEIFTKLMIEKAHSLPAHHMLDKPLEH
KQDTYSSNPGERYPVHRPNLQPPPPRQQVTTLSESYALRNCPPTPSNGSYEVFTRAHQAI
SHELYSGSVTQVKSSQNRPSYPSCSQDLSGLSPKSSLSSCSFAPGGAFSRTLDEPSQGPR
RFFAFPEKDPLGILDSSSCKPPSPKHHMLNSPPCHQSQVPTMNTYSLPENHPGSQSSPSL
PPPFSPFPRGGTLTSPSTTRSSVSSISSPAGSVEPSPQRSRHSSASSEHFPGPTRSSSRS
PRPVASPKRSVPQSPKAILEGLPPFGQAHLGSSSNASHALTHQSNKTAPSVSLGAAQGLL
GFPLGCILGQQSNASFPASSLLTAAAKAQMASQTKPEATASSTLPNRLLNPNSMLSGAGT
QESRGLPARPHSQRRDAILKRKRQKNSPGPDTSPQDSSGHFPPSGSPLGLSKLNPPVMSK
LVGSGSQSEEDMGRSKVVHPHPVAGQTVSSLQTPRSSVEESPSQSKTPGLSPSSQDLSSQ
LLGLVGQLVQTTTEQNSGTPLPQKLPSTPVGTNTSTSTARPNHSPVAKSASAPNVAPSCV
TEGVNELPCSLPPSGDSFPFLGQDQVLPFPASPALLNLALLGSLPLSLSLNQHQQILNQG
LLNLLSSSLLGSTDIGLLGLQNPSLSLPSAVGDPETTALQTLLMASLLQGPLLPLGGLGL
PQLDLQQNNQQQSTLLPSLMPLLDSLPTSQTDTAEKNEAPLSLPETFPDNGLQPLLFPPA
SPALMALNSALLAASLGAVDSSTCTGQNCINTSCTGSASVTTTTITPALSEGKPPPSEPH
SPFHLPQSQAPTPGRLNTLMPPLLNPLITAGLLGDLSALNANTGAQLGSLQSLLGAQALL
PNQQTYLPSLSGALGMQMFQGQSLLQGQRSGSQTQSGPEKEVNQSSQPEGSITPTSQTTS
FCQQTSDSTLSSPRTEVSGKVQTLPLPALRLGSSFVSNTSSAFETSPNSKGSQFQGPACI
DIPPDIPPDPPNTDKLSHSLDSSSTETDPEVSPLKKHRLLPDPIGPSEVPNGASPNLFPW
MGSPHSSNALNMSELELPKGKERGYRFNGRARGERSYGRRPRGHRLSGSRTSFWRYNGGD
VVEGEVAGHSQELSQPLMGIPAFSPHWQEEGGQPREQEVEVPPQLLKRSRRGRRRGQNSQ
RISSRLETVPPKWTTDPSNGLNTDRPIIRPNRPGRPAKNRRRRMI
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtggcagtgagagtggaggaggagatagctatggagggcccccaacagttcaa
gtaccaattggctggcagagaagaatggagccaggcatggtggtgtatatcagtccaagt
ggaacggttcttacgtctatggatcagttaagagcctacttagtgactgatggaacctgt
aaatgtggcctggagtgtcctcttaacatctataaggtttttaactttgatcccagggca
gtagtaaagcggcgaagtgctgaggatgtgaaggcggaggaggatatgaccaaactctgc
aaccatcgtaggaaaattgtggctcttgctactctatacaagagtattgagagtactccg
cttgcactacagaaccaagctgctggatgtagccccagtcagaactttcatggagcatcc
acaagcccaaagatgggacagcatcactgctccttggatcctgaaatcttcaccaaactt
atgattgaaaaagcccacagcttgcctgctcatcacatgttggataaaccgctggaacac
aaacaggatacctattcttctaaccctggagaaaggtaccctgttcatcgaccaaactta
caacctcctccacccaggcagcaagtgacaactcttagtgagtcttatgccttaaggaac
tgtccgccgacaccatcaaatggtagctatgaggtgtttactagggctcaccaagccata
tcccatgagctttactctggctctgttacacaagttaagtcttcccaaaaccggccttcg
tacccctcatgcagtcaggatctttcaggcttgtctccgaagtcatcacttagctcttgt
agttttgcaccaggtggggctttctcccggacgctggatgagccttctcagggccctcgg
cgcttttttgcctttcctgagaaagatccactgggtattttggactctagcagctgcaaa
ccacccagtccaaagcaccacatgttaaactcgccaccttgtcaccagtctcaggttccc
acaatgaacacttattctcttcctgaaaaccatcctggcagccagtcttcgccgtcacta
ccccctcctttctctcctttcccacggggaggtacactgacttctccttccaccactagg
tcttcagtgtcctctatctcatcccccgctggcagtgtggagccatcccctcagcgttct
cgacactcctctgcctcatctgagcacttcccaggccctactaggtcaagttccaggtct
cctaggcctgttgcctctcctaaacgctctgtaccccagagtccaaaagcaatacttgaa
ggcctccctccatttgggcaggcccatttgggatcctcttcaaatgccagccatgcctta
acccaccaaagcaataaaacagcaccatctgtgtctttgggagcagcgcaaggcctactg
ggctttcctcttgggtgcattttgggccagcaaagcaatgcctccttcccagccagcagt
ctccttacagcagctgcaaaggctcaaatggcaagtcaaaccaaaccagaagccacagcc
tctagcactttacctaatcgtttgttaaatcccaactccatgctttctggagctggcaca
caggaaagccggggacttccagccaggcctcactcccaaagaagagatgcaatcttgaaa
agaaaaagacagaaaaattctccaggtcctgacacgagtccccaggattctagtgggcat
tttcctccttctggtagtcctcttgggctctctaaattgaatcctcctgttatgtcaaag
ctggtagggagtgggagtcagtctgaggaagacatgggaagatccaaagttgtacatcca
cacccagtagcgggtcaaacggtttcttctcttcagacacctcgatcatcagttgaggag
tccccaagccaaagtaaaactcctggcctgtctccatcttcccaggaccttagcagccag
ctacttggtcttgtaggacaactagttcagacaactacagagcagaactcagggacacca
ttaccacagaaattaccttcaacccccgttgggacaaatacatctacttcaactgcacga
cccaaccattctcctgtagcaaagagtgcttctgctcctaacgtggcgccaagctgtgtg
acagaaggtgttaatgagctgccttgttccttgcctccatctggggatagctttcccttt
ctcggtcaggatcaggtactgccgtttcctgcatctcctgctctattaaacctagcgctg
ctgggatcattaccactttcccttagtctaaaccagcaccaacaaattctgaaccaaggt
ttgctaaatttactgtcatcgtctttgcttggaagtacagatattggacttctaggcctt
cagaatccatctctgtccttgccttctgcagtgggggaccctgaaactactgctttgcag
actttactgatggcttctctcctgcaaggtcctcttttaccactagggggactagggcta
ccgcagcttgatcttcaacaaaacaaccaacaacaaagcacccttttgccatctctcatg
cctctgttggactcattacctacttcacaaactgacacagctgagaagaatgaagcaccc
ctgtctctacctgaaactttccctgataatggtctccaaccactgcttttcccacctgca
tcacctgctctgatggcgctcaactctgcacttctcgctgccagtcttggggctgtggac
tcctccacttgcactggacagaactgtatcaatacctcctgcactgggtctgcctctgtt
actacaaccactattacacctgccttatcagaggggaaaccccctccatctgaaccacac
agccccttccacctcccgcaatcgcaagcaccaacacctggcaggctcaacacactgatg
ccacctctgctcaacccactgatcaccgctggtttattaggggacctatctgcactgaat
gcaaatactggtgcccaattaggaagcctccaatctctgctgggtgctcaggccttactc
ccaaaccagcagacatatcttccctccctctctggagctctgggaatgcagatgttccaa
ggacagtcccttctccaaggacaacgcagtggctcccagacacagtctggccctgaaaaa
gaagtcaaccagtcttcccaacctgagggctctattacccccacatctcaaaccacatct
ttttgtcagcagacttctgactctaccttgtcctctccaagaacagaagtgtccgggaaa
gtacagacgttaccacttcctgccttgaggcttggttcttcttttgtctccaacacctca
agtgcctttgaaaccagccccaattccaaaggctcccagttccagggaccagcatgcata
gacatccctcctgatataccacctgaccccccaaatacagataagttatctcactctttg
gattcttcttctactgagacagatccagaagtatctcctcttaaaaaacaccggctgcta
ccagatccaataggtccctcagaagtccccaatggagcttccccaaaccttttcccatgg
atgggttctccccattcttctaacgccttaaatatgtctgagctggagctccccaaggga
aaggaacgtggctataggttcaatggacgagccagaggagaaaggtcatatggccggcga
cctcgagggcatagactttctggatcgcggacctccttttggagatataatggaggagat
gtggttgagggagaagttgcaggacatagccaggaactatcacagccacttatgggaatc
cctgcttttagccctcactggcaggaagagggtggacagccacgggagcaggaggtggag
gtgccaccccagctgctgaaacgctcccgcagaggaaggaggaggggccagaattcacag
aggataagcagtcggctagaaactgttcctccaaagtggacaactgatccatccaatggt
ttaaatactgaccgtcctatcatccgaccaaacagacccggtcgtcctgccaagaacaga
agacgaaggatgatatag
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