Xenopus tropicalis (tropical clawed frog): 100126685
Help
Entry
100126685 CDS
T01011
Symbol
mysm1
Name
(RefSeq) histone H2A deubiquitinase MYSM1 isoform X1
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100126685 (mysm1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100126685 (mysm1)
Peptidases and inhibitors [BR:
xtr01002
]
Metallo peptidases
Family M67
100126685 (mysm1)
Ubiquitin system [BR:
xtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
100126685 (mysm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
JAB
Prok-JAB
Myb_DNA-bind_6
Myb_DNA-bind_7
UPF0172
Motif
Other DBs
NCBI-GeneID:
100126685
NCBI-ProteinID:
XP_012817008
Xenbase:
XB-GENE-1032957
UniProt:
A0A6I8R7B0
LinkDB
All DBs
Position
4:complement(86804923..86828145)
Genome browser
AA seq
860 aa
AA seq
DB search
MVVLHCASCRETLPCVNVVGKVFVVIYDSLSTGFAPEHYIESEWKNEGLNPWTLDSSISE
ENREAIKKMLLEEQYYLSNKPLAGKFWSDSKEGEKCCIKSSPQKKIPRVMVRTPAKTSCS
PVKWTTEEKKLFEQGLATFGRRWTSIAKLIGSRTVLQVKSYARHYFKNKCKLEGFVKEEA
KIGTESLQILDFQDHENEPEITDEKPTLRGRADPNLNAIKIEKLSDDEEIDITDELDEPL
RNNPDLVKVITDTTDANKENKLETDIVQQKSNITIEILQTDIPKHVLQQSDIECLDSVHS
LTCIPSPKWMLYPQQCEDDDYDHSDEQHCFQEKCLSPHAEHLTDHPDEQHCFQEKCLSSH
AEHLTVLCENENDSQDEDDEIKPPDQDIEIDRNLILDEEKQAIPEFFEGRQAKTPDRYLR
IRNYILDQWENCKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFGCEQAIYNRP
RPVDKTKGKEGKDTLEAYKLAHRLQSMRTRKRRVRDPWGNWCDAKDLEGQTYEHLSAEEL
ARRHEEKIKSYKYSKGTRQVKSSFDPFQLIPCSTFSEEKKAPFQVKVTCEAMLILDLHAH
VSMAEVIGLLGGRYTESESVVEICAAEPCNSLSTGLQCEMDPVSQTQASEALASRGYSVI
GWYHSHPAFDPNPSIRDIDTQAKYQNYFSRGGAKFLGMIISPYNQRNPHPQSQVSCLIIS
DELSKDGSYRIPYKFDVEYMQGELQWELVFEKTRWIIEKYKSSHSSVSMNKRFRHDSELT
CLQKLLICMKKTLGNTTCPLLTEELLLHRIEEFFLTSYNTSRKSNYETEEHDPYKQNVDT
IVARDSFQDYSKEPNGHQSL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcctgcactgtgcctcttgtagggagacgttgccatgtgtgaatgttgtcggg
aaggtatttgtagttatttatgacagcctcagtactggatttgctcctgagcactacatt
gaatcagagtggaaaaatgaaggccttaatccatggacattggacagttcaatcagtgaa
gaaaacagagaagcaattaagaaaatgctgcttgaggaacaatattatctatctaacaag
ccactagcagggaagttttggtcagattctaaagaaggagaaaaatgctgcatcaaaagt
agtccccagaagaaaatacctagagtaatggtacgaacccctgctaaaaccagctgtagc
ccagtgaaatggactacagaagaaaaaaaactctttgagcaggggctggctacttttggc
agaagatggacaagtattgcaaagctgattgggagtcgaactgtattacaagtaaaaagc
tatgcaaggcactactttaaaaataagtgtaagctggagggttttgtcaaagaggaggca
aagattggcactgaaagtcttcagatacttgattttcaggaccatgaaaatgaacctgaa
ataacagatgaaaagccaaccttacgtggacgagccgacccaaacctaaatgctatcaag
attgaaaagctgtctgatgatgaagagatagacataacggatgagttggatgaaccactt
cgtaataatccagatcttgttaaagtcataactgatacaacagatgcaaataaagagaac
aagctagagacagacattgtacaacaaaaaagtaatatcacaatagaaattttgcagact
gatattcccaaacatgtgctgcaacaaagcgacattgaatgcttggattctgtacattca
ttaacttgtataccctccccaaaatggatgttgtatccacagcaatgcgaagatgatgat
tatgatcattcagatgaacagcattgtttccaagagaaatgcctctctcctcatgcagaa
catctaactgatcatccagatgaacagcattgtttccaagagaaatgcctctcttctcat
gcagaacatctaactgtattatgcgagaatgaaaatgattctcaagacgaagatgatgag
ataaagccaccagaccaagatatagaaattgacagaaatttaattttagatgaagaaaaa
caagcaatcccagagttttttgaaggtagacaagcaaaaactccagatcgttacctgagg
atccgtaattatattttggatcaatgggaaaattgtaaacccaaatatttgaataagacc
tccgttcgtcctggtttaaaaaactgtggtgatgtgaactgtattggacgcatacacact
tacttggaattaattggtgcaattaactttggctgtgagcaagctatctacaacagacct
cgcccagtagataaaacaaagggcaaagaaggaaaagacactttggaggcatacaaatta
gcacaccgactgcaatctatgcgcactagaaagaggcgtgtcagagacccctggggaaac
tggtgtgatgcaaaagatcttgagggacagacatatgagcatctctcagccgaagaatta
gctaggagacatgaggagaaaatcaaatcttataaatattccaaaggaacaagacaagtc
aagagctcatttgatcctttccagttgatcccctgctctacattcagtgaagagaaaaag
gcgccatttcaagtgaaagtaacatgtgaagctatgctaatattagacctgcatgcacat
gtctccatggctgaggtgattggcttattaggtggaaggtatacagaatctgaaagtgtt
gtagaaatctgtgcagcagagccatgcaatagtctcagcaccggactgcagtgtgagatg
gaccctgtctcacagacacaagcatcagaggcactggcgtccagaggatacagtgtaatc
ggatggtaccattcacatcctgctttcgatccaaatccctctattcgagatattgacaca
caggcaaaataccagaattatttttctcgtggtggagcaaaattcttgggaatgataata
agtccttacaatcaaagaaatcctcatccccagtcccaggtgtcttgcctgattataagt
gatgagctgagcaaagatgggtcttacagaataccttacaagtttgatgttgaatacatg
caaggagaactacagtgggagctggtttttgaaaagacaagatggataatagagaagtac
aaatcatctcacagtagtgtttcaatgaataaaagattccgtcatgacagtgagctgaca
tgtttacagaagcttttgatatgtatgaagaaaactttagggaatacaacctgtcctctt
ttaacagaagaattactactacatcgtatagaggaattctttctaaccagttacaacacc
agcagaaaaagcaattatgagactgaagaacatgatccgtataaacaaaatgttgatacc
atagtagcaagggacagtttccaagactattcaaaggaaccaaatggacaccaatctctt
tag
DBGET
integrated database retrieval system
