Xenopus tropicalis (tropical clawed frog): 100127188
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Entry
100127188 CDS
T01011
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100127188 (tut1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100127188 (tut1)
2.7.7.52 RNA uridylyltransferase
100127188 (tut1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100127188 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
RRM_1
PAP_assoc
RL
RRM_PARP14_3
zf-C2H2_2
zf-met
RRM_DEAH11
DNA_ligase_IV
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
100127188
NCBI-ProteinID:
XP_002941502
Xenbase:
XB-GENE-491663
UniProt:
A9JTS5
A0A803KE50
LinkDB
All DBs
Position
4:complement(36812667..36822766)
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AA seq
843 aa
AA seq
DB search
MEAEESSSSVVPLPQDVQSVVRGGFRCLLCGVNIPNRPSLTDHLSGRRHVRLCEERDKRN
QQQERSVYVSNFPRETSEEELRDVFQKISPVRNIVMDKDRGLYAIVEFESKDGMCAALEE
PQIKLSGKRLRVKPREKKEFQRKKGGSPRTLQPPDPEALSKELLNCADVEQQIKKLVSLC
SPSHHESHLRELLLSLLQETFTEFFPGCQLLPFGSSVNGFEISGCDLDLYLDLGDDEAEN
VEGKAEKEIQNREESSTDMEVSIEDPETERKEEEMEIGNSKNDEDEDVTPGLSLKGLSSE
EILEVVGKVLRHCVPGVHGVQSVPTARRPVIHFQHKTSGLRGDVTLNNRLALRNSSFLRL
CSDLDARVPQLVYTVRYWARVNQLAGNPFGGGPLLNNYALTLLVFFFLQTRNPPVLPTLV
HLREETANEVPQVIDGWDCSFPSDPAQVKESGNQQSLSSLLSEFFSFYASLDLHLLILCP
CNGLTIPLPFSSPPPAWSEGFRLGPLNIQDPFELSHNVCGNVSSRAARRFISHCAAAARI
CRTPNYNLHSTSHPWGITPILLPPPTERECVGRGGTEISIPLGGVSPEKTYAAVSKVFVD
VLLCTLEEGREDSCQEGKALELSTKHAKAQCKVEKNEVGGELGEQEVPCKAEQNNTKEAS
KQKSIFKTEEGMTESARRKREMTEPCMSDMTNGKKRRLEFTRGIWDHHLATSAMEEEMCG
EAHKDSKTKIDYSNNGTAQWELLVWHRVWEGRRKERRRKQKGEADGVELEIAVSQALALE
KEDKCDGPLMKLILTAQLTVKESLQLYLTPKFDPQGLSSTFFHFLEGYLPRMVAQIQGCG
DPV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaggagagtagttcttcggtggttccgctgccgcaagatgttcagtccgtt
gtgcggggagggttccggtgcctcctgtgcggggtcaacatcccaaaccgtccaagctta
acagatcacttgagtggccggcgtcatgtgcggctatgtgaggagcgagacaaacgcaat
cagcagcaggagcgcagtgtgtatgtcagtaatttcccacgtgagacatctgaggaggag
ctgagggatgtctttcagaaaatttctcctgtcaggaacatagtgatggataaggatcgg
ggcctttatgcaattgtggagtttgagagtaaggatggcatgtgtgcagccttagaagag
cctcaaataaagcttagtggaaaacgtttgcgggtaaaaccacgagaaaagaaggagttt
caaaggaaaaagggaggctcaccccgaacattgcaacctccagatcctgaagctttgagc
aaggaactgctgaactgtgctgatgtagagcagcaaataaaaaaactggtttctctgtgt
tctccatctcatcatgagagtcacctgcgagagttactgctctcactgctacaggaaacg
tttacagagttcttcccaggatgccaacttcttccctttggttcttctgtaaatggcttt
gagattagtggctgtgacttggatttatatttggatcttggagatgatgaggcagagaat
gtggagggaaaggcagagaaagagatacaaaatcgagaggagagctccactgacatggaa
gtaagtatagaagaccccgaaacagagaggaaagaagaggaaatggaaatcggaaacagc
aagaacgatgaagacgaggatgtcactccaggtctttctctgaaaggtctttccagtgag
gagattctagaagtggtaggaaaagtcttacgtcactgtgtgcctggtgtacatggagtc
cagagtgtccccactgcccgtcgccctgttatacacttccagcacaagacatctggacta
agaggagatgtcaccctaaacaacaggcttgctcttcgtaattcatccttcttgcgcctc
tgctctgatttggacgctcgtgtaccgcagcttgtgtacacagtgagatattgggctaga
gttaaccagcttgcaggtaatccatttgggggcggaccattgctgaataattatgctttg
acactcctagtattctttttcctgcaaacaagaaatcctcctgtccttcccacattagtt
catctaagagaagaaactgctaatgaggtccctcaagtgattgatggctgggactgcagc
tttccgtcagatccagcacaagttaaagaaagtggcaatcagcagagtttgagttctctt
ctctccgagttcttctctttctacgcttctttggacctgcatctgctcatcctctgtcca
tgcaatggtttgaccattccacttccattctcctctccaccacctgcctggtcagaaggt
ttccgtttgggaccactcaatatccaagatccatttgaactgagtcacaatgtctgtggc
aatgtcagctctcgtgcagctcgccgcttcatctctcactgtgcagctgctgccaggatc
tgccgtacccccaattacaacttgcattctacctcccatccatgggggatcactccaatt
ctcttacctccacccactgagagagagtgtgttgggagaggaggaactgaaatctcaata
cctctgggaggtgtttcacctgaaaaaacatatgcagctgtgagtaaggtctttgtggat
gtactgttgtgtacactggaagaaggcagagaagacagctgtcaagaagggaaagctttg
gaattaagcacaaaacacgcaaaggctcagtgtaaagtagagaagaatgaagtagggggg
gaattaggggaacaagaggtgccatgcaaagctgagcaaaataatactaaagaagcttcc
aagcaaaaaagcatctttaaaaccgaggaggggatgactgaatcagccaggagaaaacga
gaaatgacagagccatgcatgagtgatatgaccaatggtaaaaagagaagactagaattt
actagaggcatttgggatcatcacctagctacatctgccatggaagaagaaatgtgtggg
gaagcacataaagattccaaaacaaagatagactactctaacaatggcactgcacaatgg
gagttgctagtgtggcaccgagtgtgggaaggcaggcgcaaggaaaggaggcgcaagcag
aaaggggaagccgatggtgtagagctggagattgctgtgtctcaagcactggctctggaa
aaagaggacaaatgtgatgggccgctgatgaaattaatacttacagctcaactgactgtt
aaagaatctttgcagctttatctgacaccaaaatttgacccccagggccttagctccaca
ttctttcacttcttagagggttatctacctcgcatggtggcacaaattcaaggttgtggg
gacccagtgtaa
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