Xenopus tropicalis (tropical clawed frog): 100127190
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Entry
100127190 CDS
T01011
Symbol
tgif2
Name
(RefSeq) homeobox protein TGIF2 isoform X1
KO
K19553
homeobox protein TGIF2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100127190 (tgif2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100127190 (tgif2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100127190 (tgif2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
100127190
NCBI-ProteinID:
XP_002932897
Xenbase:
XB-GENE-876497
UniProt:
A0A8J0QIB6
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All DBs
Position
10:39618465..39626952
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AA seq
266 aa
AA seq
DB search
MMNSTFESLMTDHEIDHSLHTDSGEDEGSSELDISGAKRKRRGNLPKDAVKILRDWLFEH
RFNAYPSEQEKLSLSGQTNLTVLQICNWFINARRRVLPELLRKDGKDPNQFTISRKGGKS
PEMPSPRTPTSLPSVLVMPPTTAVPARILSVPLLYPVAQPVANLVSHDLILPSMVPTIKT
EEGSTTVLLPKKRARSPTHELVNTPPPSPSPPLLFGGASISRLNILAQVATMCMAEMEAE
EAKREAARSALTSLYKAAPITTSTPN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcgacttttgaaagcctaatgaccgaccatgagattgaccacagcctccat
acggacagcggggaagatgaaggcagttcagagcttgacatttcaggtgccaagaggaaa
cgaaggggaaacctcccgaaggatgctgtgaaaatcctgcgggactggctttttgagcac
cgcttcaacgcttacccatcagaacaagagaaactcagtctgtctgggcaaaccaacctc
actgtcctgcagatctgtaactggttcattaatgcccgccgacgagttttacctgagctt
ttgcgaaaagatgggaaagacccgaaccagttcactatttcacgtaaaggtggaaagtca
ccagaaatgccttccccgagaacccccacgtcgctgcccagcgtcctggtaatgccccct
acaactgctgtccctgcgaggatactctccgtgcctctgctgtacccggtagcacagccg
gtggctaacctggttagtcatgacctaatcttgcccagtatggtgcccaccatcaagacc
gaagagggtagcacgactgttttattgcccaagaaacgtgcccgaagcccaacacatgaa
cttgtcaacacaccacctccttccccctcgccccctctgctgttcggaggggcaagcatt
agcagactgaacattttggcacaagtggcaacaatgtgcatggcagaaatggaagctgaa
gaggcaaaaagggaggctgcccgctctgctcttacatcattgtacaaggctgcaccaatc
acgacaagcacccccaattag
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