Xenopus tropicalis (tropical clawed frog): 100127563
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Entry
100127563 CDS
T01011
Symbol
snx25
Name
(RefSeq) sorting nexin-25 isoform X1
KO
K17887
sorting nexin-25
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100127563 (snx25)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100127563 (snx25)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
100127563 (snx25)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100127563 (snx25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nexin_C
PXA
RGS
PX
Isy1
Motif
Other DBs
NCBI-GeneID:
100127563
NCBI-ProteinID:
XP_004911239
Xenbase:
XB-GENE-1001658
UniProt:
A0A6I8PXS4
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All DBs
Position
1:complement(44501265..44596063)
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AA seq
1046 aa
AA seq
DB search
MNPHVQHASDFDTGGSASYPALPANNAMPSPAVVSAVGAVSGMEPAENRSISRKRSLSAP
AHGCLELLHRPTEDGKNSCWYPDGLCQAPTTGDLCADEPVPCTDPPSSSSRLILAVVICL
LAVSLFHLAQGIGQPSPAGELCFTVLLLRCFVYLACALGALILGAFCVLHRTGRPTALPD
FTRAARTTGSLLPRIVHEPVQPRRVVISHNMDKALKEVFDYSYRDYILSWYGDLTKDDGQ
LYHFLSDDFWELARQLRSRLTHIDVVRVVCNDVVKNLLAHFCELKAASSRQDEQPRLFAL
HPCLKNSEEEVKFLQSCAQVLVLCLLPTRDARSRCLRIVLSEILATKVLKPLVELLSDPD
YINQMLLSQLEYREQVNERHKKAYTYAPSYEEFIKLITSSSDVEFLKQLRYQIVVEIIQA
TTIGSFPQMKRQKDPKGKETAAMKADLLRARNMKRYINQLTVAKKQCEKRIKLLGGPAYD
QQDDGAVDDSECPQSQKILQFDEILANPSFREQFRLYMERIDKRALISFWESVEYLKNAN
KTEIPQLVGEIYQNYFVESKDIPVEKPLYKEIQQSLVGNKGTEVFNKIQADVYETLKDRY
YPSFIVSDLYDRLIRKEDNVSCSCVTDDKEDGMQACEGNEEILDECNGGITEQASYAVNK
LQQLTDRLDYKRQALNSIINAPKPDKKIISKLKEEIALMEKEQSDLDLHISRTDLWCENL
GMWRAVINTSQVSEENGEQMPSYTVSVNLPDSGESENRNWIVHRKLSEFQNLHRKLSECF
PSLKKVQLPSLSKLPFKSIDQKFLEKSKTQLNHFLQNLLTDERLYQSEVLYAFLSPSPEH
LKAIDIQGKKSSFSISSFLERFPGDLFSHQEDETEEDSDLSDYGDDVDGKKDALAEPCFM
LIVEIFELRGMFKWVRKTLIALVQITFGRTINKQIRDTVNWIFSEQMLVYYINVFRDAFW
PNGKLAPSKTSRTELQCQETKQRAQQKLLENIPDALQNLVGQQNARHGIIKVFNALQENR
ANKHLLYVMMELLLVELCPEVRSQSN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccatgtacaacatgcctcagactttgatacaggaggtagcgctagttaccct
gccttgcctgcgaataatgctatgcccagcccggctgtggtgtccgctgtcggagcggta
agtgggatggagcccgcggagaatcgctccatcagtaggaagcggagtctgagcgcaccg
gctcacgggtgtctggagcttctccaccgacccactgaggatggcaagaacagctgctgg
taccctgacggcctctgccaagcgcccactacaggggacttgtgcgctgatgagcccgtc
ccatgtaccgaccctccgtcttcctcttcccgtctgatcctggctgtggtgatctgcttg
ctggcagtgtccctattccatctggctcagggtattggccagccctctcctgccggggag
ttgtgcttcactgtgttgctgctgcgctgcttcgtgtacctggcctgtgccctgggtgcc
ctcattcttggggccttctgtgtcttgcaccggactggccgacccaccgctctcccagac
ttcactcgggccgcccgcactacagggagtttgctgcctcggattgtacatgaaccagtc
cagccgaggagagtggttatctctcacaacatggataaggctttgaaggaagtgtttgac
tacagctacagggactacatcctttcctggtatggcgatctcaccaaggacgacggccaa
ctgtatcactttttgtctgatgacttctgggagttggccaggcaactgcgcagtcggctc
acccatattgatgttgtcagggtggtctgcaatgatgtagtaaaaaatcttctggcgcac
ttctgtgagctcaaggctgcgagttctagacaggatgagcagccaagactgtttgctctc
cacccctgtttaaaaaattcagaagaagaggtcaagttcttgcagtcatgtgctcaggtt
ttggttctctgcttgctgcctacacgggatgcacggtctcgctgcctacggattgtactc
tcagaaatccttgcaactaaagtgctgaagcccttggtggagctgctgagtgatccggat
tacattaatcagatgttgctcagccagctcgagtacagagaacaggtgaatgagcgtcac
aagaaggcctacacatatgctccttcctatgaggaatttatcaagctcatcacaagcagt
tcagatgttgagttcctgaaacagctacggtatcagatagtagtggaaatcattcaagca
accacaattggaagttttccccaaatgaaaaggcaaaaagatccaaaaggcaaagaaacg
gctgcaatgaaagctgacctcctgagggcacgcaatatgaaaaggtacattaaccagctg
accgttgccaaaaagcagtgtgagaagaggatcaaactccttggtgggcctgcttatgat
cagcaggatgatggagcggtcgatgatagtgagtgcccccaaagccaaaagattctacag
tttgatgagattttggccaacccatcattcagggagcagttccgattatacatggagagg
attgacaagagagctttgatcagtttttgggagtctgtggaatacttgaaaaatgcaaat
aagaccgaaatacctcaattagttggtgaaatttaccaaaattactttgtggagagcaaa
gatatccctgtagagaaacctctgtacaaagagatccagcaaagcctcgttggcaataag
gggactgaagtatttaacaagatacaggccgatgtgtatgagaccctgaaggaccgatat
tacccctcatttattgtcagtgatttgtatgaccggctcattcgaaaagaggacaacgtc
tcctgctcgtgtgtcacagacgataaggaggacgggatgcaggcgtgtgaaggcaatgag
gaaatcttggatgagtgcaatggggggatcaccgagcaagccagctatgctgtaaataaa
ctgcagcagctcacagacaggctggactataaaaggcaggcgctgaactccattattaat
gcacctaaacccgacaagaagattatttcaaaattaaaagaagaaattgccttaatggag
aaagagcaaagtgatctcgatcttcacatttcacgaacagatttgtggtgtgaaaatctt
gggatgtggcgtgctgtaataaacaccagtcaggtttcagaagagaatggagaacaaatg
ccaagttacacagtgtcggtaaatttgcccgactctggagaatcagaaaacagaaactgg
atcgtgcacaggaagctgagtgaattccagaatctgcacaggaaactcagtgagtgtttc
ccttcactgaagaaagtgcagctgccttctctgagcaaacttccttttaagtccatagat
cagaaatttttggagaagtccaagacccaattaaatcactttttgcagaatctgctgacg
gatgagaggctgtatcagagtgaagtgctttacgcctttctgagcccttcccctgagcac
ctgaaagccattgatatacagggcaagaagtcctccttctcaatctcttcctttttggaa
agatttccaggggatttattctcccaccaagaggatgaaacagaagaggacagtgaccta
tcggactatggggatgacgttgatgggaagaaagatgccttagctgagccatgtttcatg
ctaatagtggagatttttgaactgcggggaatgtttaaatgggtcagaaaaactttaatt
gcacttgtacaaatcacttttggaaggaccatcaacaaacaaatccgtgacacagtgaat
tggatcttcagtgagcagatgctggtttactacataaatgtgttccgagatgctttctgg
cccaatggaaaattagctccttcgaaaacctctaggacagagctgcagtgccaggaaacc
aaacagagagctcagcaaaaactacttgaaaacattcccgatgcactgcagaacctggtt
ggacagcaaaatgcccgtcatggtattatcaaagtatttaatgcactccaggagaacagg
gctaataaacatctactgtatgtgatgatggagctgctgcttgtagaactgtgccctgaa
gtaagaagtcagagcaattga
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integrated database retrieval system
