Xenopus tropicalis (tropical clawed frog): 100127569
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Entry
100127569 CDS
T01011
Symbol
gria1
Name
(RefSeq) glutamate receptor 1 isoform X3
KO
K05197
glutamate receptor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100127569 (gria1)
04082 Neuroactive ligand signaling
100127569 (gria1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100127569 (gria1)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100127569 (gria1)
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Gene cluster
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
100127569
NCBI-ProteinID:
XP_002941535
Xenbase:
XB-GENE-995621
UniProt:
A0A6I8RME3
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Position
3:complement(12283252..12457158)
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AA seq
902 aa
AA seq
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MLRIFAYFCTSFLGAVLGVNFPNHIQIGGLFPNQQSQEHAAFRFALSQLSEPPKLLPQID
IVNISDSFEMTYTFCSQFSKGVYAIFGFYDRKTVNMLTSFCGALHVCFITPSFPVATSNQ
FVLQLRPELQDALISVIEYYKWKKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRLLFQDLDKSKDRQIVIDCESERLNAILTQVVKLEKNIIGYHYILANLGFMDIDM
QKFKEAGANVTGFQLVNYTDTMVSRIMQQWKNYDGREQPRVDWKKPKYTSALTYDGVRVM
AEAFQSLRKQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRLEGLSGNVQFNEKGR
RTNYTLHVLELKHEGIRHIAHWNEDDKLIPLATDAQAGNDTIGVQNRTYIVTTILEAPYV
MLKKNADQLEGNDRFEGYCVELAAEIAKHVGFKYKLEIVKDGKYGARDSDMKAWNGMVGE
LVYGRADLAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHNEEFEEGKEQPTTDQSNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESADDLAKQTEIA
YGTLDSGSTKEFFKRSKIAVFEKMWTYMRSAEPSVFVKTTEEGMNRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRGAVNLAVLKLSEQGVLDKLKSKW
WYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKKMK
GFCLIPQTTVTETVRMATLPRPSTAGGSGENGRVVSHDFPKTMQTIPCMSHGAGMALGAT
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcatttttgcctatttctgcaccagctttctaggggcagtgcttggggtgaat
ttccccaaccatatccagataggggggcttttcccaaaccagcaatcccaggaacatgcc
gccttccgctttgctttatcccagttgtcagaaccccctaagctgctgccccagattgat
attgtgaacatcagtgatagctttgaaatgacctacactttttgttcacagttctccaaa
ggggtttatgccatatttggattttatgaccggaagacagtgaatatgttaacctccttc
tgtggtgctctacacgtctgcttcatcacccccagcttcccagtagccacttccaatcag
tttgtcctgcagctgcgaccggagctccaagatgccctcattagtgttattgaatattat
aagtggaaaaagtttgtttatatttatgatgcagaccgaggcttgtctgtcctgcagaag
gttctagacacagcagctgagaagaactggcaggtaaccgctgtaaatattctcaccacc
accgaggagggttaccgtctactctttcaggacttagacaagagcaaggaccggcagatt
gtgatcgactgcgagtccgagaggctgaatgcaatactcacccaggttgtaaagttggag
aaaaacatcattggatatcattatattcttgcaaacctgggtttcatggatattgacatg
cagaagttcaaagaagcaggagccaacgtgacaggattccagttggtcaattacacagac
acaatggtatccagaatcatgcagcagtggaagaattatgatggacgggaacaacctcgt
gtggactggaagaaaccaaagtacacctctgccttgacgtacgatggagtgagagtaatg
gctgaggcattccagagtttaaggaaacagcggatcgatatttcccgtcgtgggaatgct
ggcgactgtctagcaaatcctgcagtgccatgggggcaaggaatagacatccaaagggca
ttacaacaggttcggctggaagggctttcaggtaatgtccagtttaatgagaaaggtcgt
cggactaattatacactgcatgtgcttgagctgaaacatgaaggaatccgtcacattgct
cattggaatgaggatgataaacttatcccactggcaactgatgctcaagcaggcaatgac
accattggggtccaaaaccggacgtacattgtcactaccatcttggaggctccctatgtt
atgctgaagaaaaacgctgaccagttagaaggcaacgaccgctttgaaggctactgcgta
gagctggccgcggagatcgccaagcacgttggcttcaaatacaagctggaaatagtgaag
gacggaaagtatggagcgcgggactccgatatgaaggcttggaatggcatggtgggggag
ctggtttatgggagagctgatttggctgttgctcccttgacaataacactagtccgtgaa
gaggttatcgacttttctaaaccgttcatgagcttgggcatttcgatcatgatcaagaag
ccccagaaatctaaacctggagtattttccttcctggatcctctcgcttatgagatctgg
atgtgtatagtcttcgcctacatcggagtcagcgtggttctcttccttgtgagtcgattc
agcccatatgagtggcacaatgaggagttcgaggagggaaaagagcagccaaccactgat
cagtctaatgaatttggcatatttaacagcctgtggttttctttaggagcattcatgcag
caaggatgtgatatatccccaaggtccctctcaggacgaatcgttggtggtgtctggtgg
ttctttacattgatcattatttcatcctacacggcaaacctagcagccttcttgacagtt
gaaaggatggtctcgcctatagagagtgcggacgatttggccaagcaaactgagatagct
tatgggactcttgactccggatctactaaagagttttttaagagatcaaaaattgctgtg
tttgaaaagatgtggacttacatgcgttcggcagagccctcggttttcgtaaaaacaact
gaggaaggaatgaatcgagtgagaaaatcaaagggcaaatacgcttaccttttagagtcc
accatgaatgagtacattgaacagagaaaaccatgcgacactatgaaggtgggaggtaac
ttggactccaagggatatggcattgcaacccccaaggggtctccactgagaggtgctgta
aacctagcggtattgaaactcagtgagcaaggcgtcttagacaagctgaaaagcaaatgg
tggtacgataaaggggaatgtggaagcaaagactccggaagtaaggataagacaagtgca
ctgagtctcagtaatgtcgccggagtgttctacattctcattggaggtctgggattggcc
atgcttgttgcccttatcgagttttgttacaaatcaaggagtgaatccaaaaagatgaag
ggtttctgtttaattccacagacaacagtgacagaaacagtccggatggcaactctaccc
agaccttccacggcaggaggaagcggtgaaaatggaagagtggtcagccatgatttcccc
aaaaccatgcagacaattccgtgtatgagccacggtgcaggaatggctctgggagcaact
gggttatag
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