Xenopus tropicalis (tropical clawed frog): 100127667
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Entry
100127667 CDS
T01011
Symbol
wdr47
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100127667 (wdr47)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
100127667 (wdr47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR19_1st
LisH_TPL
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
TPR1-like_2nd
Beta-prop_HPS5
DUF4494
Motif
Other DBs
NCBI-GeneID:
100127667
NCBI-ProteinID:
XP_031756900
Xenbase:
XB-GENE-5787016
UniProt:
A0A8J1JIP7
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All DBs
Position
4:complement(111824460..111864027)
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AA seq
919 aa
AA seq
DB search
MTAEETINVKEVEITKLILDFLNAKKLHISMLALEKESGVINGLYSDDMLFLRQLILDGQ
WDEVLQFIQPLECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEEDPHHLEFTMQEAVKC
LHTLEEYCSSKEDYSKLCLLLTLPRLTNHAEFKDWNPSTARVNCFEEACAMVAEFIPADR
KLSEAGFKASNNRLFQLIAKGLLYECCVEFCQSKATGEEITESEVLLGIDLLCGNGCDDL
DLSLLSWLQNLPPGVFSCAFEQKILNIHVDKLMKPSKAAYADLLTPLISKLSPYPSSPIR
RPQSADAYMSRSLNPALDGLTCGLSGHDKRSVEPGSKTSPMSHSFANFHYPGVQNLSRSL
MLESTDCHSIYEESSERSETPQEKETPNSSETICQNVPPEDNQQNAGEDEEESKPEKPER
NELRESTEQFEEYYRQKLRYQQHLEQKEQQRQLYQQMLVEGGVNQAEEAEHPQNLTEQFL
NRSIKKLGELNVGMEPLEEGIQPKNKLHNGPRESSIMAPNGHSPLGTAVLQRGNQQPDGQ
SINTSTPRKRGATSYIPFPEESPVFGSANSAREQVQLEDSSGTGARKCSETDKKQQFVCL
TSLEDTQAVRAVAFHPSGSLYAVGSNSKTLRVCAYPDVIDTSNSNCPTQPPVRFKRNKHH
KGSIYCVAWSPCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGP
ESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRF
WDLRVPSCVRVIGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHP
HSSDVRSVRFSPGAHYLLTGSYDMKVKVTDLQGDLTKPLPIIEVGEHKDKVIQCRWHTQD
LSFLSSSADRTVSLWTYNV
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaggaaacgattaatgtgaaagaagtggagattacgaagttaattttagac
ttcttgaatgccaaaaagctgcacatcagcatgcttgctcttgaaaaagagagcggggtg
ataaatggactgtattctgatgacatgctatttctcaggcaactgattttagatggacag
tgggatgaagtccttcaatttatccagcctctggagtgtatggagaagtttgataaaaaa
aggtttcgctatattatcttgaaacagaaatttttggaggcactttgtgtgaacaatgca
atgtcagcagaggaggatccacatcatcttgaatttacaatgcaggaagctgttaagtgc
ctgcacacactggaagaatattgttcctccaaggaggattacagcaagttgtgtcttctt
ctcaccctcccacggctcactaatcatgcagagttcaaagactggaaccccagcacagct
cgtgtaaactgttttgaggaggcatgtgcaatggtggcagaatttattcctgctgatcgc
aagcttagtgaagctggatttaaagctagtaataatagactgttccagcttattgcgaaa
ggacttttgtatgagtgctgtgtggagttctgccaaagcaaggcaactggggaagaaatc
actgaaagtgaagtactgttagggattgatcttttatgtggcaatggctgtgatgatcta
gacctgagtctcctctcatggctccagaatttgccccctggtgttttctcctgtgctttt
gagcagaagatactcaacatccatgtagataagttaatgaagcctagtaaagctgcttat
gcagatcttctcactcctctcatcagcaagctgtctccatatccttcatcacccataagg
cgcccccagtcagccgatgcttacatgtctcgctctttaaacccagctctggatggcttg
acttgtggactgagtggccatgacaagagatcagtagaaccaggaagcaagacgtccccc
atgtcccactcctttgcaaattttcactatcctggtgtgcagaacctcagccgcagcctc
atgctagagagcactgattgtcacagtatctatgaagagtcatcagaaaggagcgaaaca
cctcaagaaaaggaaaccccaaacagcagtgaaaccatttgtcaaaacgtccctccagaa
gataaccaacagaatgctggggaagatgaagaggaaagcaaaccagagaaaccagagaga
aatgagcttcgagaatccactgagcagtttgaggaatactaccgtcagaaattacgttac
cagcagcacctggaacagaaggaacagcagaggcagctttaccaacagatgcttgttgag
ggaggggtaaaccaggctgaagaagcagagcatccacagaatcttactgagcagtttctt
aacaggtccatcaaaaagttgggagaactgaacgtggggatggaaccccttgaggaaggc
attcagcctaaaaacaaactacataatggccccagggaaagcagcattatggcccctaat
ggtcactccccactgggtacagctgtgctacagaggggcaatcaacagcctgatggccag
agcatcaataccagcacgcctcgcaaacggggagccaccagctacattccttttccagag
gagtctccggtgtttggaagtgcaaatagtgcaagagaacaggtgcaattggaagattct
tcgggcactggagccagaaaatgctcagagactgacaagaagcagcagtttgtctgccta
acctccctggaggacacccaggctgttcgtgctgtagccttccatcctagcggttctctg
tatgctgtggggtccaactccaaaacactgagagtctgcgcataccctgatgtgattgac
acaagtaattcaaactgtcccacgcaaccccctgttcgctttaagaggaacaagcaccac
aaaggctccatttactgtgtggcttggagcccttgtgggcagctgttggctactggctcc
aatgataaatatgtcaaagtgttgcctttcagtgctgagacctgcaatgcaacaggtcca
gacctggagttcagcatgcatgatggtactataagggatttggcttttatggaaggacca
gagagtggtggggcaatattaatcagtgcaggtgctggagactgtaacatctacactaca
gattgccagcgtggtcaaggccttcatgccctcagtgggcatacagggcatattctggca
ctctacacatggagcgggtggatgattgcttctggatcccaggacaagacagtgcggttt
tgggacctacgagtgcccagctgtgtgcgagttattggaacaactttccatggcactggc
agtgcagtggcctcagttgcagttgatcctagtgggagactccttgccactgggcaggag
gattctagctgcatgctgtatgatatccgaggaggccgcatggtgcagagctatcaccca
cactccagtgatgttcgctctgttcgcttctcacctggagctcattaccttctcactggt
tcctatgacatgaaggtcaaagtaacagacttacaaggtgaccttacaaagccacttccc
atcattgaagtaggtgagcacaaggacaaggtgatccagtgccgatggcatacacaagac
ctctccttcctctcttcttctgctgacaggactgtatcactatggacttacaatgtgtag
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