Xenopus tropicalis (tropical clawed frog): 100127682
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Entry
100127682 CDS
T01011
Name
(RefSeq) uncharacterized protein LOC100127682
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100127682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100127682
Transporters [BR:
xtr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100127682
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100127682
NCBI-ProteinID:
NP_001106493
Xenbase:
XB-GENE-5944458
UniProt:
A8WGF5
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Position
4:152803590..152889937
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AA seq
599 aa
AA seq
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MATNGTKVADGQISTEVSEAPVTNDKPKTLVVKVQKKKTEEVERDTWKGRFDFLMSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAP
MFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTTLPWKHCDNSWNTERCFSNYSIA
NTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVV
YFSATYPYIMLVILFFRGVTLPGALDGILFYITPKFSKLSDSEVWLDAATQIFFSYGLGL
GSLIALGSYNRFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRPIEQVAASG
PGLAFLAYPEAVTQLPISPLWAVLFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRTRR
EIFIAVVCVVSYLVGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRF
YDNIEEMVGYRPCIWWKLCWSFFTPIIVAGVFLFSAVQMTPLTMGSYVFPSWGQGVGWFM
ALSSMVLIPGYMVYLFLSLKGSLKQRLQVMIQPTEEVVRSENGPEQLSQSNSANKEAYI
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacggaactaaagtcgccgatggacagatctcgacagaagtgagcgaggcc
cccgttaccaacgacaaacccaagaccctggtggtgaaggttcagaaaaagaaaacagaa
gaagtggaaagagacacctggaaagggaggtttgacttcctgatgtcctgtgtgggttac
gccatcgggctcgggaatgtgtggcgcttcccctatctctgcggcaagaacggcggcggg
gcttttctcatcccgtatttcctgacactcatattcgctggagtccctctctttctgttg
gagtgctctctggggcaatacacatcgattgggggccttggagtatggaaacttgccccc
atgtttaaaggtgttggactcgccgccgccgtcctttccttttggctaaatatctactac
attgttatcatcgcctgggccatctactacctctacaactccttcaccacaaccctccct
tggaaacactgtgacaattcctggaacaccgagcgctgcttctccaactacagtatcgcc
aacaccaccaacatgaccagcgccgtcgtggaattctgggagcgcaatatgcaccaaatg
accgacgggctggagaaaccggggcagatccggtggccgttggcgatcacattggccatt
gcatgggttttggtctatttctgcatctggaaaggagtcggctggactggaaaggtggtg
tacttctcagcgacctacccctacatcatgctggtcatcctgttcttcaggggggtgacc
ctgccgggggccctggatgggattctgttctacataacccccaaattcagcaaactctcc
gactccgaggtctggttggacgcggcgactcagatcttcttctcgtacggcctggggctc
ggctccctcatcgccctgggaagttacaatcgcttccataacaacgtatacagggattct
atcatcgtctgttgcatcaactcctgtaccagtatgttcgctgggtttgtcatcttctcc
atcgtcggcttcatggcccatgtgactaagcgaccaatagagcaagtggccgcctcaggt
cctgggttggcgtttctggcctatcccgaagcagtgacacaactccccatatctccgctg
tgggcggtgcttttcttttccatgttgctgatgctcgggatcgacagtcagttctgcaca
gtggaaggatttatcaccgctctggtagacgaatttccgaagttgttgcgcacacggaga
gagatttttattgcagtcgtttgcgttgtttcctacttagtgggactgtccaacattacc
cagggcggaatttatgtattcaagctgttcgactactactcggccagtgggatgagcctc
ttgttcctggtcttctttgagtgcatctccatctcttggtgttatggcgtcaacagattc
tacgataacattgaggaaatggtcggctacaggccctgtatctggtggaaactctgttgg
tcttttttcacccccatcatcgtggcaggagtgttcctgttcagcgccgtacagatgacc
cccctcactatgggcagctacgtctttccctcctgggggcagggagtcggctggttcatg
gctttgtcgtcaatggtgctaattcccggttacatggtgtatctcttcctgtctctgaaa
ggatcattgaaacagcgcctgcaagtcatgatacaaccaacggaggaagtggtccgctct
gaaaacgggccggaacaactgtcccagagcaactccgccaacaaggaagcttatatataa
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