Xenopus tropicalis (tropical clawed frog): 100127736
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Entry
100127736 CDS
T01011
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100127736 (cfap52)
Cilium and associated proteins [BR:
xtr03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100127736 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_like
Beta-prop_SPT8
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_NWD2_C
WDR54
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_BBS7
CFAP43_N
Beta-prop_RIG_1st
DUF7586
DHFR_1
Motif
Other DBs
NCBI-GeneID:
100127736
NCBI-ProteinID:
NP_001106545
Xenbase:
XB-GENE-989292
UniProt:
A8WH02
LinkDB
All DBs
Position
10:complement(49389053..49394244)
Genome browser
AA seq
617 aa
AA seq
DB search
MAEQGEDNRLELQGIIGFNGHVPSGLISHPDREHLIYPLGCTVIIENLSSRKQQFLQGHT
NNVSCVAASRSGRYLASGQVTYMGFKADILLWDYGRREACAKLTLHKVKVEALAFSPNDL
YLVSLGGQDDGSVVVWNVAKREAICGSPASSLSSGHATTIIFANNSDDVFMTGGNGTLRV
WDVDLPNRKMRPTECQLGQMKRVVTCLQVAEDDSCFYCGTSSGDILTINTKSKLLSSFAP
QKGKFSLGVTALRLLKTGELLVGSGDGKLALCKGPNYKAAKTVQLQGSVTSISLRGQGHQ
FFVGTGGAQIYRFSYPEFKEELIATCHSEAINDIAFPFGTSELFATCSKNDIRVWHTATH
KELLRITVPNMTCLAIDFMRDGKSIISAWNDGRIRAFMPESGRLMYCIENAHSMGVTAIA
ATSDCKRIVSGGGEGQVRIWEISKETQRLVQSMKEHKSSVTCIKLKGNNRECLTASSDGT
CIIWDIVRFTRLQMVLSNTLFRCVCYHPEEFQFVTSGTDRKVGYWEVFDGSAIRELEGSK
SGAINGMDICDQGAHFVTGGDDKLVKVWDYNEGEVTHVGIGHSGNITRLKICPLSKYIIS
VSTDGAILCWDYPYGLR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacagggggaagacaaccggctggagctgcagggaatcatcgggtttaacgga
catgttccgtccggcctgatcagtcaccccgacagggagcacctcatttaccccctgggc
tgcaccgtcatcatcgaaaacctgagcagccgcaagcagcagttcctgcagggtcacacc
aacaatgtgtcgtgcgtggcggcgtcccggagcggccggtacctggcgtctgggcaggtc
acctacatgggatttaaggcagacattctcctctgggattacgggagacgcgaggcctgc
gccaaactgacgctgcacaaggtcaaggtggaggctttggccttttctcccaatgacctc
tacctggtgtccctcggaggccaagacgatggaagcgtggtggtgtggaatgtggcaaag
cgagaagccatctgcggcagcccagcatcgtccctcagctccgggcacgccaccaccatc
atcttcgccaacaatagcgatgacgtcttcatgaccggagggaacgggacacttcgggtc
tgggatgtggatctgcccaacaggaagatgcgccctacggagtgccagctgggccagatg
aagagagtggtgacgtgcctgcaggtggcagaggacgacagctgcttctactgcggcacc
tcctcgggggacatcctcacaatcaacaccaagagcaagttactgagcagctttgccccg
cagaagggcaagttcagcctgggggtgacggctctgcggctgctaaagacgggcgagttg
ctcgttggttctggcgacgggaagctggcactctgcaaaggtccgaactacaaagcggcc
aagactgtccagcttcagggctccgtcacttccatctccctccgaggccaagggcaccag
ttcttcgtgggcacaggaggggcacagatatacagattcagttacccagaattcaaagag
gagctcatcgccacgtgtcacagtgaggccatcaacgacatcgcctttccctttggcacc
tcagagctcttcgccacctgttccaagaacgacattcgagtgtggcacactgcgacccac
aaggagctgctccggatcaccgtgcccaacatgacctgcctggccatcgacttcatgcga
gacgggaagagcatcatctcagcttggaacgacggcaggattcgggcgtttatgccggaa
agtgggcggctgatgtactgtatagagaatgcccacagcatgggagtgacggccattgct
gccaccagcgactgcaagcggatagtgagcggaggaggagagggacaggttcggatctgg
gagatcagcaaagagacccagcggctggtccagtccatgaaggaacacaagtcttctgtt
acctgcatcaagttaaaggggaataaccgggagtgtctgactgccagctctgatggcacc
tgcatcatatgggacattgtccgctttacacgactccagatggtcctgtccaacacgctg
ttccgctgcgtctgttatcaccccgaggagttccagtttgtcaccagcggcaccgacagg
aaggtcggatactgggaggtgtttgacggatcggccatcagggaactggaagggtccaag
tccggggccattaatggcatggatatatgtgatcaaggcgctcactttgtcacaggtggc
gacgacaagctggtgaaagtttgggattacaacgagggcgaagtgacccacgtgggcatc
gggcacagcgggaacatcacccggttgaagatctgccccctttccaagtatatcattagc
gtcagcaccgacggggcaatactgtgctgggactacccctatgggctcagatag
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