Xenopus tropicalis (tropical clawed frog): 100127797
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Entry
100127797 CDS
T01011
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100127797 (pus7l)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
100127797 (pus7l)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100127797 (pus7l)
Prokaryotic type
100127797 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
DKNYY
Motif
Other DBs
NCBI-GeneID:
100127797
NCBI-ProteinID:
NP_001106585
Xenbase:
XB-GENE-999746
UniProt:
A9JTM8
LinkDB
All DBs
Position
3:64419693..64431122
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AA seq
694 aa
AA seq
DB search
METESLSPTVFGSLCYVSDHRGFFGTIKNSSADFVVTEIDVSGQLVTEVQARHEKSTEKS
ERNGAQDIIRKQRINPKDAERKGTTCEFTEFATDISGTGGSQVQTSDIVEDDCELDPCRL
LYPVLDVHVQESLNQFACTVRSVWRSSVTANDLSELSLGLYPEKDERALIHSAVRQTFPF
LVTFTKSSELFVKPNLDYQELCQLTSEKEADAFFKFLDAKLENSRFTFNPDDCKEHRTAV
HHFISKKFGKLVETKSFSEKDISGLLRVCITVRFREKIGSSRKRNRTEDTEKQDVYTGFT
LQKDNLETLEAISYLSCILGVLPSDFSYAGIKDKKAITYQAMVVKKVTPERLKQIDAMSE
KKGMKIKNIHPVNKHLQLGHLSGNHFNIIVRDIQNHSDDLSVYVQERIEEAVYNIKTKGF
LNYYGPQRFGKGQNCQSHDIGLALLKEEMERAVTLLLTPDSCEDPVNNAKQYFIETVDAK
GTLALMPHYKIRERMVLRAINRYGMNNEGCVRAWLSLPHSSRIFYIHAFCSKVWNEAASY
RFTLYGTKVVQGDLVDCNESANENSLVHIVTAEEEESSAYTIDQVVLPMPGYSIKYPTNK
IGQWYSETLAKAGLQSCAFRVSSLQLNVPGCYRHILKYPHDLFYKLTFEDQAKGTENKIA
DAGVSLKPVFVVEFDLDSSCYATVCLREMMKCNF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagagagtctgtctcccactgtttttggttctctctgctatgtgagtgatcat
agaggattttttggaacaataaaaaattcttcagctgattttgtggtaacagaaattgat
gtctctggtcaattagttacagaagtgcaagcaagacatgaaaaatcaacagaaaaatcc
gaaagaaatggtgcacaagacattattaggaagcaaagaataaacccaaaagacgcagaa
cgtaaagggacaacatgtgaatttacagagtttgccactgatatttctggaactggtgga
agtcaggtgcagacatctgatattgttgaagatgattgtgaactggatccctgccgtttg
ctgtatcctgtcttggatgtacatgttcaagagtctttaaaccagtttgcatgtactgta
agatctgtttggagatcctcagtgacagcaaatgacttaagtgagctttctttgggttta
tatcctgaaaaggatgagagagctcttatccatagtgcagtgcgtcagacattccctttt
cttgtaacatttaccaaaagctctgaacttttcgttaaacctaacttggattaccaagag
ctttgtcagctgacttctgaaaaggaagcagatgctttttttaaattcttggatgcaaag
cttgaaaattccagatttacatttaatccagatgactgcaaagaacataggacagctgtg
caccattttattagtaagaaatttggaaagctagtagaaacaaaatcattttcggagaaa
gacatttctggtctacttagagtatgtataactgttagatttcgagagaaaattggctca
tccagaaaaaggaatagaacagaggatactgaaaaacaggatgtatacacaggctttact
cttcaaaaagacaatctggagacacttgaagccattagctatttgtcctgtatacttggg
gttcttccttcagacttcagttatgctggaatcaaagataagaaagccattacttaccaa
gccatggtagttaagaaagttactccagaaaggttaaagcaaatagatgccatgagtgag
aaaaaaggaatgaaaataaaaaacatacacccagtaaataaacacctgcaacttgggcac
ttgagtggaaatcactttaacattattgtaagggacatacaaaaccacagtgatgattta
tcagtatatgttcaggaaagaattgaagaagcagtttacaacataaagacaaaaggcttc
cttaactactatggaccacagagatttggaaaggggcagaattgccagtcacatgatatt
ggtttagctctgcttaaggaggaaatggagagggctgtaacgttactacttactccagat
tcatgtgaagatcctgttaataatgcaaaacaatactttattgagactgtggatgcaaag
ggaacacttgctttaatgccacattacaaaattcgagagagaatggtgcttcgagcaata
aatagatatggaatgaataatgagggatgtgtgcgtgcatggctcagccttccccattca
agtcgcatcttctatatccatgcattttgcagtaaagtctggaatgaagcggcatcctac
aggtttacattgtacggaacaaaggttgtgcaaggagatttggtagactgtaatgagtct
gctaatgagaattcactagttcatattgttacagcagaagaagaggagtccagtgcatac
actatagatcaagttgtgcttcctatgcctggttacagtattaaatatcctaccaataaa
attggacagtggtatagtgaaactcttgccaaggctgggttacagtcatgcgcatttcga
gttagcagcttgcagcttaatgtgcctggatgctatagacatattttaaaatatcctcac
gatttattttataaactgacttttgaagatcaagcaaaaggaactgaaaataagattgct
gatgcaggagtctcactgaagccagtttttgtagtggaatttgatcttgactcttcttgt
tatgcaacagtttgtctaagagagatgatgaaatgtaacttttga
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