KEGG   Xenopus tropicalis (tropical clawed frog): 100127877
Entry
100127877         CDS       T01011                                 
Symbol
rabggtb
Name
(RefSeq) geranylgeranyl transferase type-2 subunit beta
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:xtr01006]
    100127877 (rabggtb)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xtr04131]
    100127877 (rabggtb)
Enzymes [BR:xtr01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     100127877 (rabggtb)
Prenyltransferases [BR:xtr01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   100127877 (rabggtb)
Membrane trafficking [BR:xtr04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100127877 (rabggtb)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    100127877 (rabggtb)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C
Other DBs
NCBI-GeneID: 100127877
NCBI-ProteinID: NP_001106636
Xenbase: XB-GENE-953600
UniProt: A9JTX7
LinkDB
Position
4:81021645..81033099
AA seq 331 aa
MGTPQKDVVIKSDAPKTLLLEKHAQYIESYGAKKDDYEYCMSEYLRMSGIYWGLTVMDLM
GELQRMNKEEILAFIKSCQHDCGGFSASIGHDPHLLYTLSAVQILTLYDSLSAVDSNRIV
DYVQSLQKEDGSFAGDKWGEIDTRFSFCAVATLALLGRLDAINIEKAIEFVLSCMNFDGG
FGCRPGSESHAGQIYCCTGFLAITDQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVC
YSWWVLASLKIIGRLHWIDREKLRLFVLACQDEETGGFADRPGDMVDPFHTLFGIAGLSL
LGEERIKPVNPVFCMPEEILQRINIQPELVS
NT seq 996 nt   +upstreamnt  +downstreamnt
atgggaacaccacagaaggatgttgttatcaaatcggatgcaccaaaaacgctgctactt
gagaagcatgcacagtacattgagtcatatggagctaagaaggatgattacgaatactgt
atgtcagagtatttacggatgagtggcatctactggggcctgactgttatggatctcatg
ggagagctgcagcgcatgaacaaagaagagatactagcatttatcaaatcgtgccaacat
gattgtggtggatttagtgctagtattggtcatgatcctcatcttttgtatacactaagt
gctgttcagatcctcacactgtacgatagcctttctgcagttgacagcaatagaattgtt
gattatgtgcaaagccttcaaaaagaggatggatcatttgctggagacaaatggggggag
attgatacacgattttctttctgtgctgttgcaacacttgcccttttgggcaggctggat
gctattaacatagaaaaagccatagaatttgttttatcttgtatgaactttgatggtggt
tttggttgcaggccaggttctgaatcccatgcaggtcagatctattgttgcacaggattt
ttggctataacagaccagctacaccaagtcaatgctgacttgcttggttggtggctttgt
gagcggcagctgccatctggtgggctcaacgggcgacctgaaaagctaccagatgtatgt
tattcatggtgggtgttggcttccttaaaaattattggtagactccactggattgataga
gagaaactgcggttatttgtattggcttgccaagatgaagagaccggagggtttgctgac
agaccaggagacatggtggatccatttcatacactgtttggcattgctgggctatctcta
ctgggggaagaaagaattaagccagttaatccagtgttttgcatgccagaagaaatcctt
cagaggataaacattcagccggaacttgtgagctag

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