Xenopus tropicalis (tropical clawed frog): 100127878
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Entry
100127878 CDS
T01011
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X12
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100127878 (gapvd1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100127878 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5996
Motif
Other DBs
NCBI-GeneID:
100127878
NCBI-ProteinID:
XP_002943194
Xenbase:
XB-GENE-997388
UniProt:
A0A8J0QU88
LinkDB
All DBs
Position
8:complement(27917918..27962507)
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AA seq
1459 aa
AA seq
DB search
MVKPDIHTLARHLKQERLYVNSEKQLIQRLNADVLKTAERLYRTSWIAKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NHENAQSVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPQRLLRRGTCAFSI
IFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPSKLIERFSPAQQEKLFGEKGS
EAFRQRVQEMVESNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMFKTLSCVEGLEVS
EVRSMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLALTGFEEGD
SRNKNNLSKFDKSCVAAFLDVVIGGRAVETPPLSSVNLLEGLSRTVVYMTYSQLMSLLGF
LRTVISSDQLREEDRMALENLLATVPQTKPGKSNNDTTPYSTPQLSPATTPACKKNRLPI
VTRSRSKTSLMEAENEGSPQEVTPGQPEEVLVISLGTGPQLTPGMMSENEVLNMQLVDGG
QVDVPVDESKLHGKPDKTLRFSLCSDNLEGISEEEENPCSTGPSNRSNSVSSLDLEGESV
SELGGGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWS
TDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSILLDPCTGSTISETTSEAWS
VEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTEVREVSSRPSTPGLSVVSGISATSE
DIPNKIEDLRSECSSDFGGKDSVTSPEAEESVHGPHHITAPPTQTESLLAMFDPLAPASN
EVVRPKVHYARPSHPPPDPPVLEGASGGNEARLPMFGSHVFVPMESEAYRQRHSCPERLV
RSRSSDIASSIRRPMSDPGWVRRGVNEDRELPTGTAINALINPPQASSSSPSKDSSRGEP
EEKKDSDDERSDRNKPWWKKRFVSAMPKAPIPFRKKEKHEKEREDLVQDRFSVADDSTSQ
LGPHSQAAEDILAKYRNAIKRTIPNEGSSVPYEGADAVGDGESLHDSPRDEALQNMASDD
LLDSASQVAHPQEPAFSYRDAKKKLRLALCSADSVAFPVLSHSTRNGLPDHTDPEDNEIV
CFLKVQLAEAINLQDKNLMAQIQETMRCVSRFDSRSCSKILASIAEDYRKRASYIAYLTR
CRQGLQTTQAHLERLLQRVLRDKEVSTRYFTTVCVRLLLESKEKEIHEFIQDFQKLTAAD
DKTAQVEEFLQSLYGAMAQDVIWQNASEEQLQDAQIAIERSIMNRIFKLAFYPNQDADIL
RDQVLHEHIKRLSKVVTANHRALQIPEVYLREAPWPSAQTEIRTISAYKTPRDKVQCILR
MCSTIMNLLSLANEYSVPGADDFVPVLVFVLIKANPPCLLSTVQYISNFYSNRLTGEESY
WWMQFTAAVEFIKTIDDRK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagccggatatccacactcttgctcgccatctgaagcaagagcggctctatgtg
aactcagagaagcagctcatccagaggctgaatgctgatgtgctgaagacagcagaaagg
ctctaccgaacatcatggatagccaagcaacaaagaattaacctggacagactcatcctc
acaagcgctgaagcatctccagctgagtgttgccaacatgcaaaggtcctggaagatact
cagtttgtggatggttacaagcagctgggcttccaagagactgcatatggagagtttctt
aatcgcctgcgtgagaacccacgcctcattgcatcttgcctcgtggctggagaaaaactc
aaccatgagaatgcccagagtgtcatacacactgtctttacctctctgtatggcaactgt
ataatgcaggaggatgagagctacttgttacaggtcctgcgttacttaattgagtttgaa
ctgaaggagagtgataacccccaaaggctgctcaggagaggcacatgtgcttttagcatt
atcttcaaacttttctctgaaggccttttctccgccaagctcttcctaacagcaacccta
catgagccgatcatgcagttgctggtggaagatgaggaccacctagaaactgacccttca
aaattgattgagcggttttctccagcccagcaggaaaagttgtttggggagaagggcagt
gaggcttttcgtcaaagggttcaggaaatggtggagtcaaatgaagctaagcttgtgaca
cttgtcaataaattcataggatacttgaagcagaacacatactgcttcccacacagtcta
aggtggatcgtctcacagatgtttaaaactttgtcctgtgtggaggggctggaggttagt
gaggtgagatctatgtgcaccgacctgctactgacttgtttcatctgcccagcaattgtg
aacccagagcagtatgggataatttcagatgctccaatcaatgaagtggcaaggttcaac
ttaatgcaggtggggcgtctcttacagcagctggcactaactggatttgaggagggagat
tcacggaacaagaataacctcagtaaatttgacaaaagttgtgtggctgctttcctggat
gtggttattggtggtcgagcagttgaaacacctcccctttcatctgtgaatctcttggaa
ggattaagtcgaacagttgtatacatgacatacagccaacttatgagtctattggggttc
ttgcgtactgtcatctccagtgaccaactgcgggaggaggacaggatggcactggaaaac
ctcctggctacagtgccccagaccaagccagggaagagtaacaatgatactacaccttac
agcacccctcagctctcaccagccacaacaccagcctgtaagaagaacaggctacctata
gttactcgtagtagaagcaaaacaagcctgatggaagcagagaatgagggatctccgcag
gaagtcactcctggtcagcctgaagaagtcctggtcatctcactagggactggtccccag
ctcacaccaggaatgatgtctgaaaatgaggttttgaacatgcagctggtagatgggggt
caggtggacgtgcctgtggatgaatctaaacttcatggaaagccagacaaaaccctgcgt
ttctcactttgcagtgacaacctagaaggcatttcagaagaagaggaaaatccgtgttca
acaggtccttcaaatcgttccaactcagtttcctctttggatctggaaggggagtctgta
tctgagctaggaggaggaccatccggaagcaatggggtggaggctttgcagttattggaa
catgaacaagctaccacacaggataatctagatgacaaactgcgcaaatttgaaattcga
gacatgatgggattgacggatgatagagatatatcagagacagtcagtgagacatggagc
acggatgtgcttggaagtgattttgaccccaacattgatgaagatcgactacaagaaatt
gcaggtgcagcagctgagaacatgctgggaagcctgctgtgccttcccggctctggctca
atactgcttgatccttgtactggatccactatatctgagactaccagtgaagcatggagt
gttgaggtgctccctagtgattctgaagcaccagatctaaagcaagaggagcggctgcag
gaactggagagctgttcaggtttgggaagcacatcagatgacactgaagttagagaggtc
agctcccggcccagcactccaggactcagtgtggtgtcaggtatcagtgctacctcagag
gacatcccaaacaagatagaggacctacgctcagagtgcagctctgactttggaggaaag
gattctgttacaagtcctgaggcagaagagtctgttcatggacctcaccatataactgca
cctccaacccagactgaatccttgttggccatgtttgacccactagctccagcatccaat
gaagtggttcgacctaaagtacactatgcgagaccctcacatccgcctcctgacccgcct
gtactggaaggagcaagtgggggaaatgaagctcgtcttcctatgttcggttctcatgta
tttgttcccatggagtctgaagcttacaggcagagacactcatgtcctgaaagactggtg
cgcagtcgcagctccgacatcgcttcttccatacggaggccaatgagtgaccctggctgg
gtgcggcgtggggtgaatgaagatagggagctgccaacaggaactgcaattaatgcacta
attaatcccccccaggcttcatcctcctcaccaagcaaggactcttccaggggagagcca
gaagaaaaaaaagacagcgatgatgagcgatcagataggaataagccttggtggaagaag
cggtttgtgtctgcaatgcccaaagctcctatcccatttaggaagaaggaaaaacacgag
aaggagagggaagacttggtacaagacaggttttcagtagcagatgactcaacatctcag
ctagggccacattcccaggcagcagaagacatcctggctaagtacaggaatgctattaag
aggacaatccccaatgaaggttcctccgtgccctatgaaggagcagatgctgttggagat
ggagaaagccttcatgattctcctcgtgatgaagctttgcagaacatggcctcagatgac
ctgcttgattctgccagccaagtagcccacccacaggagcctgcattctcctatagggat
gctaagaaaaaattacgcctggccctgtgctctgcggattcagtagcgttccctgtattg
tctcattcgacacggaatggcctgccagatcacacagacccagaagacaatgagattgtg
tgcttccttaaagtccaacttgcagaggccataaacctgcaggacaaaaacctgatggct
cagatccaggaaactatgcgatgtgtgagccgatttgacagccgctcctgcagcaaaatt
ttggcatccattgcagaggattaccggaagagggcctcatatattgcatatctaacaaga
tgccgacagggactacagaccacccaggctcaccttgagcgcctcctgcagagagtgcta
cgagataaagaggtctccacgcgctacttcaccactgtctgtgtgaggcttctacttgag
agcaaagagaaggaaatccatgaatttatccaagattttcaaaagttaactgcagctgat
gataaaacagcacaagttgaagagttcttgcaatcactttacggggctatggcacaagat
gtgatttggcaaaatgccagtgaggagcagctgcaagatgcacagattgctattgagcga
agcattatgaaccgcatctttaagctggccttctatcccaatcaagatgcagatattctg
cgagatcaggtcctgcatgaacacattaaaaggttgtctaaagtggtgactgccaatcac
agggcactgcagatacctgaggtgtatctgagggaggctccttggccatctgcccaaacc
gaaatccgtaccatcagcgcatacaagacacccagggacaaagtgcagtgcatattgcgc
atgtgctcaacaatcatgaaccttctaagcctggccaatgagtactctgtcccaggagca
gatgattttgttcctgtgctggtttttgtccttattaaggctaatcccccctgcctacta
tcaacagtgcaatatatcagcaacttctattccaatcggctcactggcgaggagtcctac
tggtggatgcagttcacagctgctgttgagttcattaaaaccattgacgatcgcaagtaa
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integrated database retrieval system
