Xenopus tropicalis (tropical clawed frog): 100134998
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Entry
100134998 CDS
T01011
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100134998 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100134998 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
100134998 (sdc3)
Proteoglycans [BR:
xtr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
100134998 (sdc3)
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
100134998
NCBI-ProteinID:
XP_002938874
Xenbase:
XB-GENE-490747
UniProt:
A0A8J0QS80
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Position
2:82815592..82865829
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AA seq
388 aa
AA seq
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MYLAFGIIQGAGLLFIITQSALAERWRSEFEDERPVDLESSGDDDLFEDEDMDDVYSGSG
SGNFELESGLDLGFRFTTKTPISPPTVTALKPAPTDDFLPPVQSTWVPPTTQASVVHRHN
PWVPPEAPDTPSLPAAPTPTIPSKQAATTEATATETVRTTEVRRLQPVVVVSTEIMATPS
STDKDMFTWEATDEQEVTSFNTESGRVWPTEDWRTSVEDIKVEETEKVSPTLQPQTESWE
VTAVTSRDSDFEIPISGGPSGDFEIQEEDVVPQTEPPTLPDLGNEVLLPATAPPDLARGR
KPDTGLIDNTIDSGNTLAQMPQKNILERREVLIAVIVGGVVGALFAAFLVMLLIYRMKKK
DEGSYALEEPKPASVSYQKPETHEEFYA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtatttggcctttgggattatacaaggggctgggctgctcttcatcatcacacaatct
gctctggctgaaaggtggagaagtgagtttgaagatgagcgaccggttgatctggaaagc
tctggggatgatgacttgtttgaagatgaggacatggatgatgtatactctggttcagga
tcaggcaattttgaactggaatcgggcttggatttggggttcaggtttacaacaaagact
cccatttctcctccaacagtaacagcattaaaacctgctcccactgacgattttctccct
ccagtacaaagcacctgggtccctccaacaacccaggcctctgtagtacaccggcacaat
ccatgggttccaccagaagctccagatacaccgtctttgccagctgcccccacacccacc
attccttccaaacaagcagcaactacggaagctactgctactgaaacagtgaggacaact
gaggtacgtaggttgcagcctgttgtggtggtttccacagagataatggccacaccaagc
tcaactgataaagacatgtttacgtgggaggctactgatgaacaggaggtgacaagtttt
aacacagaaagtggcagggtctggcctacagaagactggaggacaagtgtagaggacatc
aaggtggaagaaacagaaaaagtgtccccaacactgcaacctcagactgaaagttgggag
gtcacagctgttacttcacgtgatagcgactttgaaattccaatcagtggtggaccaagt
ggtgactttgagatccaagaggaagatgttgtaccccagacagagcccccaacattacca
gacttgggcaatgaggtcttgcttcctgcaacagcaccacctgaccttgcccgaggaagg
aagcctgatactggcctaatagataacacaatagattctggaaacactttggcacaaatg
cctcagaaaaatattctagagagaagagaggtattaatagcggtgatagttgggggtgtg
gttggagctctgtttgccgccttcctggtgatgctgctgatttatcggatgaaaaagaaa
gatgaaggaagttacgctctggaggaacccaaaccagccagtgtctcttaccagaaacca
gaaactcatgaggaattttacgcatag
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