Xenopus tropicalis (tropical clawed frog): 100135001
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Entry
100135001 CDS
T01011
Symbol
lta
Name
(RefSeq) lymphotoxin-alpha precursor
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04060
Cytokine-cytokine receptor interaction
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100135001 (lta)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100135001 (lta)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xtr04052
]
100135001 (lta)
Cytokines and neuropeptides [BR:
xtr04052
]
Cytokines
Tumor necrosis fators
100135001 (lta)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF2671
Motif
Other DBs
NCBI-GeneID:
100135001
NCBI-ProteinID:
NP_001107150
Xenbase:
XB-GENE-493358
UniProt:
A9JPI2
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Position
8:complement(74480620..74485473)
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AA seq
204 aa
AA seq
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MFLSRMIRVPKRLLLRGHLIGALLTFLCIICPASGIPTQRDVQQTPKANDQKGNQIKFKD
TTNRKPAAHLEANPFIKNSLNWRSDLDNSFICCGLLLNNNTLHITKNGLYFVYTQATFSG
NTCLEGDSIFLSHSVVLDSKQFAEKTSLLSAQKTACKTSVLWSRSIFLGGTFALENGDIL
YTVTQGQNHLALYPGEAYFGLYAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtccagaatgatccgtgtccctaagaggctgttattgagaggacacttaata
ggtgcactcctgaccttcctctgcatcatttgccctgcaagtggcataccaactcagaga
gatgtgcagcaaacaccgaaggctaatgatcaaaaaggtaatcaaataaaatttaaagac
actacaaacagaaaaccagcagcccatttagaagccaatcccttcatcaaaaactcttta
aactggaggagtgatcttgacaactccttcatttgttgtggcctgttacttaacaacaac
accctgcatatcaccaagaatggcctttattttgtgtacactcaggccactttcagtggg
aacacctgtcttgaaggtgactctatcttcctgtcacatagtgtggtgcttgactccaag
caatttgcagaaaagacttcactactgagtgcacagaagacagcttgcaaaaccagtgtg
ttatggagtagatctatctttttgggagggacatttgcccttgagaatggtgatatactg
tatactgtgacccagggacagaaccatcttgcactatatcctggtgaggcttattttggt
ctctatgccttgtga
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