Xenopus tropicalis (tropical clawed frog): 100135149
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Entry
100135149 CDS
T01011
Symbol
taf1d
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit D
KO
K15215
TATA box-binding protein-associated factor RNA polymerase I subunit D
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100135149 (taf1d)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100135149 (taf1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1D
Motif
Other DBs
NCBI-GeneID:
100135149
NCBI-ProteinID:
XP_002932327
Xenbase:
XB-GENE-5867424
UniProt:
A0A8J0QLQ6
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All DBs
Position
2:complement(100283320..100295171)
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AA seq
306 aa
AA seq
DB search
MATIAAMFEEGSEPDAHSYDILQSQELFSDSDCNLLTKDASKPNKSPTNSHHGRLLDSCS
ESSSSLFQTEITCTPSRTRRRQTANRPKPLSPLSSLSDSSDFEPLPKNVPLEKIFERFRK
MKKKHKRKRQKKKYRKHLITEKKPKKPPTKKLTIPLQEKYRRLKERTVEFPFTGQKYLHF
KRYLPYEQSVFGGFLSHIEKLKCDRHLQNSLQGMDLGEDLENESLEMHKYGYLDDAGPIS
PIAEHDANTTSNEGLCNYDAKIVENDSFILKYSVPSKGKWCVKRKKKINTLNSEPNNLNF
QEDGQV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctaccatcgcagcaatgtttgaggaaggaagtgaaccagatgcacacagctatgat
attcttcaaagccaagaactttttagtgattcggattgtaatttattaacgaaggatgcc
agtaagccaaacaaaagtccaactaacagtcatcatggccgtctgctggacagctgttct
gaatccagtagtagcctattccagactgaaattacctgcacaccttcaagaaccaggaga
cgacaaactgcaaatagacccaaacccttgtcaccactgtcatctttatctgactcctca
gactttgaaccattaccaaagaatgtccctttggaaaagatctttgagcggttcaggaaa
atgaaaaaaaaacataagagaaaaagacagaaaaagaagtacagaaagcatttaattaca
gaaaagaaacccaagaaacctccaacaaaaaagctcactattcctttgcaagaaaagtat
cgccgacttaaagaaagaacagttgagttcccttttactggccaaaaatatttgcatttt
aaacggtatcttccttatgagcaatctgtttttggtggatttctgagccatattgaaaag
cttaagtgtgatcgacatctgcaaaattcattacagggcatggatttaggggaagattta
gagaatgaaagtttagaaatgcataaatatgggtacctggatgatgctggaccgatttca
cctatcgctgagcacgatgcgaatactaccagtaatgaaggtctgtgtaattatgatgca
aaaattgtggaaaatgactcatttatattaaaatacagtgtgccaagcaagggaaaatgg
tgtgttaaaaggaagaagaaaattaatacattgaattctgaaccaaacaaccttaatttc
caggaagatggacaagtctga
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