Xenopus tropicalis (tropical clawed frog): 100135167
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Entry
100135167 CDS
T01011
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X3
KO
K20133
USP6 N-terminal-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100135167 (usp6nl)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100135167 (usp6nl)
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
100135167
NCBI-ProteinID:
XP_012815490
Xenbase:
XB-GENE-998647
UniProt:
A0A8J0SJV7
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Position
3:82457461..82543682
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AA seq
821 aa
AA seq
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MNTETDQDASVKAAQERAEIVAKYDRGREGAKIDPWEDADFLLYKVTDRFGFLHKEELPI
HDEVAQKQKLLEIERTTKWVKMIKSWDKYKNSEKLHRRIYKGIPLQLRGEVWSLILEVSK
LKEERKDLYLVLKQKARRLSADIRQIDLDVNRTFRDHIMFRERYGVKQQALFHVLAAYSL
YNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVPGFPKLLRFQEHH
DRILKKFMPKLKQHFETQELYTSLYTMKWFFQCFLDRTPFTLNLRIWDIYILEGERILTA
MSYAILKLHKRTLIKQSLEDLIEFLQEELARDFHYDDDYVIDQLSLSMTELRRAKLDFPP
PGKDEEFPKKPLGQIPPEPQPTVLNHVVNGQRTTHRLPSQVKSDKVPSPSKLLHNSPNNE
RQRKNSMEKPNLKMAKKGHASRTEQNKVEIEYRKSPDYSLNQKDSKLYNHAAANKNSNAT
PNASRGITPLWKMPSEPKNKDLLNIAEGKGKPPDYNAANQLTSQAVIVKQKSRSVDTEGK
RGSNASLYDNVPGGEDSENTDENRHSSDSFTPRNTVYSTSTASRNPSKGSSPSRISENSG
IVFVSHSPSHSVQIQGPDDVFSIKQPPPIYSNPPLYTENSVTKPHSEQYSPINLMSPSKR
SYVQSFDLPPDKMPANLTARQYNVTSPSHRIEVLPADESATLHLSSFNQKSNTQYILPPV
DYHTDHTFFPDAAFGPIGQPLNREVSQSYLSSLQKSPNLPPSTGQHYNFSSVSAISPVRL
RTSPRSNKVPPLQYLHSTSGATPQPFRNPRDGIIMHESVML
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaaacagaccaggatgcatctgttaaagctgctcaggaacgagctgaaata
gttgcaaaatatgaccgaggccgagaaggagcaaagattgatccttgggaagatgctgac
tttttactttataaagttactgatcgatttggatttttacacaaagaagaactgccaatt
catgatgaggtagcacaaaagcaaaaactgcttgaaattgaaagaactacaaaatgggtg
aaaatgataaaaagctgggataagtacaagaacagtgaaaagcttcacaggaggatttat
aagggcattccacttcagcttagaggggaagtgtggtctctaatcttggaagtttcaaag
ctgaaagaagagagaaaagatctttacctggtcctaaaacaaaaagcaagacgcttgtct
gctgacatcagacaaattgatttggatgtgaaccgaacgtttcgagaccacattatgttc
agagaacgatatggtgtaaagcagcaagctttgtttcatgtgttggcggcatattcactg
tataacacggaagttggatactgtcaagggatgagtcagattacagctttactgctgatg
tatatgaatgaagaagatgccttttgggctctggtaaaactgttctcaggccctaaacat
gctatgcatggtttttttgttccaggtttcccaaagcttttgagatttcaagaacatcat
gacaggatactaaagaaatttatgcctaaacttaagcagcatttcgaaactcaggaactt
tatacaagtctgtacaccatgaaatggtttttccagtgcttcctagatcggactcctttc
actctaaatttgaggatatgggacatttacatacttgaaggagagaggattcttaccgcc
atgtcttatgctatattaaaacttcacaaaaggaccctaattaaacagtcactggaagat
ctcattgaattcctacaagaggaacttgccagagattttcattatgatgatgattatgta
attgatcagctcagcttgtccatgactgaacttagacgtgcaaagcttgactttcctcct
cctggcaaagatgaagaatttccgaaaaaacctctgggtcagattcctccagagcctcaa
cctacggttctaaatcatgttgtgaatggtcaaaggacaacacacagacttccctctcaa
gttaaatcagataaagtaccttcacccagtaaactgttacataactcaccgaacaatgaa
aggcaaaggaagaactcaatggagaaacctaatttaaaaatggcaaagaaaggacatgct
tctcgtacagaacaaaacaaagtggaaattgaatataggaaatctccagattattcttta
aaccagaaggatagtaaattatataaccatgctgcagctaacaaaaattcaaatgcaaca
ccaaatgcatcaagaggtataacacctttgtggaagatgccttcagaacctaaaaataag
gatctcttaaatatagctgagggtaagggtaaaccaccagattataacgctgcaaatcag
ttgacatctcaagctgtgattgtcaaacagaaaagtaggtctgtggacacagaaggtaaa
agagggtccaatgcatctctgtatgataatgttcctggaggggaagatagtgaaaatact
gatgaaaatagacatagctctgattcctttaccccgagaaatactgtttactcaacaagt
actgcatcccggaatccctctaaaggttccagtccttcgagaatatctgaaaattcagga
attgtcttcgtatcgcactccccatcacactcagtacaaattcagggtccagatgatgta
tttagcataaaacagccaccaccaatatacagcaatccacccctttacactgaaaattca
gtgactaaacctcatagtgaacaatattcacccataaacttgatgagcccttcaaagaga
tcttatgtgcaaagctttgatttgcctcctgataaaatgccagcaaatcttactgcaagg
caatacaatgtcacatctccttctcacagaatagaagtcttacctgccgatgaaagcgca
actctgcatttaagtagttttaaccaaaaatcaaacacccaatatattctaccaccagtg
gattatcatacggaccatacgttttttcctgatgctgcatttggaccaattgggcagcct
ttaaatagagaggtctctcaaagttatttatccagtctacaaaagtccccaaaccttcca
ccatcaacaggtcagcactataatttctcttctgtttctgctattagtccagtgaggcta
aggacttctcctcgttcaaataaagtaccaccattacaatatcttcattcaacttctgga
gctactcctcagccatttagaaatccacgtgatggtatcataatgcatgaatctgtgatg
ctgtga
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