Xenopus tropicalis (tropical clawed frog): 100135656
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Entry
100135656 CDS
T01011
Symbol
vps50
Name
(RefSeq) syndetin isoform 2
KO
K23288
syndetin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100135656 (vps50)
Membrane trafficking [BR:
xtr04131
]
Protein recycling
Others
EARP complex
100135656 (vps50)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
ERp29
DUF2887
Motif
Other DBs
NCBI-GeneID:
100135656
NCBI-ProteinID:
NP_001016219
Xenbase:
XB-GENE-952128
UniProt:
A0A8J0PH52
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Position
6:32146304..32251819
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AA seq
254 aa
AA seq
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MQKIKSLMTRQGSKSPQDSFHDLSPIENLRTPTKEELRELRERATDPQAQQELINSIEDI
YFSSDSFDIVKYELEKLPPVLNLQEVEEYRDKLKHQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNVAKEGFTQASLGLLANQRKRQQLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFRHYSCIRYTYWSIFLFSCWPNISMQYV
CFKCKHDFMLYLSV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtccctaatgacccgccagggttctaaaagtccacaggacagtttc
catgatcttagcccaattgagaacttgcggactcctacaaaggaggagctacgagaactt
cgtgaaagggccacagatccacaagcacaacaggagttaattaacagcattgaagatata
tatttctccagcgactcttttgatattgtaaaatatgagcttgagaaactccccccggtt
ctgaatctgcaagaagtggaagaatacagagataaacttaagcaccagcaggcggcagta
tcaaagaaagttgcggatctgattcttgaaaaacaacctgcatatgtcaaggagctggaa
cgtgtgacttcactacagacaggcctgcagctagctgctgtgatttgcactaatggaaga
aggcaccttaatgtggcaaaggaaggattcactcaagctagcctgggacttcttgcaaac
caaaggaaaaggcagcagctgattggcctactgaagtctctacgaactattaaaacgctg
caaagaacagatgttcggctaagtgaaatgctagaggaggaagactatcctggagctatt
cagctctgtttggagtgccagaaggcagctagcacctttagacactacagctgtataagg
tacacatattggtcaattttcctgttttcgtgttggccaaatatatcaatgcagtatgtt
tgttttaaatgtaaacacgatttcatgctctacttatctgtttaa
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