Xenopus tropicalis (tropical clawed frog): 100135747
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Entry
100135747 CDS
T01011
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100135747 (ubtf)
03021 Transcription machinery [BR:
xtr03021
]
100135747 (ubtf)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
100135747 (ubtf)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
100135747 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
100135747
NCBI-ProteinID:
XP_002935582
Xenbase:
XB-GENE-966565
UniProt:
A0A7D9NK92
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Position
10:complement(18513025..18525841)
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AA seq
700 aa
AA seq
DB search
MNGAAGGVAKGNMTAPKDQDQWSQEDMLTLLQTMKSLLPSQDNSKFKTTESHLDWNKLAF
KNYSGSMCRQKWMEISNEVRKFRTLTELILDAEEHVKNPYKGKKLKKHPEFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQKEKLDFERNLAKFR
DEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKIYLKLHADASTKDVKEALGKQWSQLSDK
KRLKWIHKALEQRKLYENIMREYMQKHPELNLTEEGITRSTLTKAERQLKDKFDGRPTKP
PPNSYSMYCAELMANMKDVPSTERMVLCSQRWKLLSQKEKDAYHKKCEQKKKEYEVELMR
FLENLPEEEQQRVLAEEKMVGIRKGTNTPASKMATQDAAKVKSRSSQADKKKAADERAKL
PETPKTAEEIWQQSVIGDYLARFKNDRAKALKCMEATWLNMEKKEKIMWIKKAAEDQKRY
ERELSDMRSAPTPTTAGKKVKFLGEPKKAPMNGYQKFSQELLSNGELNHLPLKERMVEIG
SRWHRISPAQKEYYKKLAEDQQRIYRTQFDAWMKTLSSQDRAAYKEQNSNKRKSTTKIQT
PSNKSKLVVQSKSEDDDDDDDDDDDDEDDEDDEDEDKEDSSEDGDSSESSSDEDSEDGEE
NEDEEDEEEDDEDDEEDDDNESGSSSSSSSSADSSDSDSN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcagctggcggtgtagcaaaaggaaacatgacagccccaaaagatcaagac
caatggtcccaagaggatatgctgactctcctacaaaccatgaagtcactcctgcccagc
caggacaactctaagtttaagacaacagagtctcacctagactggaacaagctggctttc
aaaaattattctggttccatgtgtcgccagaagtggatggaaatttccaatgaggtcagg
aagttccggactcttactgagttgatcttggatgcagaggaacatgttaaaaatccatac
aaagggaaaaaactgaagaaacacccagaatttcccaagaagccgctcaccccttatttc
cgcttcttcatggaaaagagggctaaatatgcaaaactacatccagaaatgagtaatctg
gatctcaccaagattctgtccaaaaaatacaaagagttgccagagaaaaaaaagatgaaa
tacatccaggacttccagaaagaaaagctggactttgagaggaacctggctaaattcagg
gacgagcatcctgatctcatgcaaaatccaaagaaatctgatgtcccggaaaagcccaag
acccctcagcagctgtggtataaccatgagaggaagatctacctcaaactgcatgctgat
gccagcacaaaagacgtgaaggaagcattagggaagcagtggtcccagttatctgataag
aagcgcctgaaatggatccataaggcactggagcaacgcaagctatatgaaaacataatg
agggaatatatgcagaagcacccagaactgaacttaacagaagagggcattactcgctcc
actctcaccaaggccgagcgacaactgaaggacaagtttgatggccggccaaccaagcct
ccaccgaacagttactcaatgtactgcgcagaactgatggccaatatgaaggatgttccc
agcactgaacgcatggtcctctgcagccaaaggtggaagctgctctcccagaaggagaag
gacgcctaccacaagaagtgtgagcagaaaaagaaagaatatgaagtggagctgatgcgt
ttccttgagaatctcccagaggaggagcagcaaagggttctggcagaagaaaagatggtg
ggtatcagaaaaggaactaacaccccagcatcaaagatggccacccaggatgctgcaaag
gtaaagagcagatcctcacaggcagacaagaagaaagcagcagatgagagggctaaactg
ccggagacccccaaaaccgcagaagaaatctggcaacagagcgtgattggagactatctt
gctcgatttaagaatgaccgtgcgaaagccctgaagtgcatggaggccacatggttaaat
atggagaaaaaggaaaaaatcatgtggataaagaaggcagccgaggaccagaaacgctat
gagagagaactaagtgatatgcgttctgctccaactccaactacagctggaaagaaggtc
aagtttttgggagagcccaaaaaagcacccatgaatggctaccagaagttctctcaggag
ctcctgtccaacggagaactcaatcacctcccccttaaggaacgaatggtagaaattgga
agccgatggcacaggatttcccctgctcaaaaggagtattacaagaagctggcagaggac
caacagaggatctatcgtacacaatttgatgcctggatgaagactttatcgtcacaagac
cgtgctgcatacaaggaacagaattcaaataaacgcaaaagtacaacaaaaatacagact
cccagcaacaaatccaaattagtagttcagagcaaatcggaggatgatgatgacgatgac
gatgatgacgacgatgatgaggatgatgaagatgatgaagatgaagataaggaggactca
tctgaagatggagattcttcagagtctagcagtgatgaggacagtgaggatggtgaggag
aatgaagacgaagaagatgaggaggaggatgatgaggatgatgaagaggacgatgacaat
gaatcaggatccagctcttcttcctcttcttctgcagactcttctgactcggactctaac
tga
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