Xenopus tropicalis (tropical clawed frog): 100144658
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Entry
100144658 CDS
T01011
Symbol
palld
Name
(RefSeq) palladin isoform X1
KO
K22029
palladin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100144658 (palld)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100144658 (palld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
C2-set_2
BiPBP_C
Perilipin
Tropomyosin
Phage_GPO
Receptor_2B4
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
100144658
NCBI-ProteinID:
XP_017951326
Xenbase:
XB-GENE-854910
UniProt:
A0A6I8SLS4
LinkDB
All DBs
Position
1:complement(50229767..50419372)
Genome browser
AA seq
1668 aa
AA seq
DB search
MANKILDQALPLPLMLKNSYPNETAMQESLSGNISEASSHDSFYDSFSDLNDEPADANFP
ELSAFLSQDEMNKSLDIAREAFSGSEHEESFQEHFAIPAPLKTKDSFKDLKLSNPESLRK
QDNIIRNNVHNNQNTLPITSCKVVATDVRKMISPLLTTSPSIIRTLQAQKASKNMGKCDI
SKTPIPKTRAKAFHGESGTQNNECTKAATFIDELSAIFRETTKARNRRTNGDSSSPDSGY
LSPKKDMPINMTSSVNENEVEIKQELKPKDRQCIKEIKNSFHEIQSQSNQPEEKVIHGRQ
CIKGMENSFQEIQSQSNQPEEKVIHNKQFIKDMDNSFQKIQSQYNQPEEKIIQSRQCNKG
MENSFQEIQSQSKQPEEKVIHNKQFIKDMDNSFQKIQSQCNQPEEKIIQGRQCIKEMENS
FHEIQSLSKQPEEKVIQSRECIKGMENSFHEIQSLSNQPEEKVIQGRQCIKGMENSFHEI
QSLSNQPEEKVIQGRKCIKGIENSFQKIHSQSNLPEEKVIHGTANKSVNPPAAARFIQKL
RSQEVAEGSRVKLECRATGNPLPEIRWFCEGKELSNSPDIHISSDSNGLHTLVIAEAFEE
DTGRYTCVASNCLGSDTSSAEIFVEGASSSDSESESFAFKSKQGAMPQAQKKTSSVSLTI
GPSSPKCGITTAVMQPISIPVQQVRSPTSYLYQDRSKTPTFCAPAFTKELQNLTASEGQV
VVLECRVKGTPPVKVKWFRQGSEIQDSPDFRILQKKPRCASEPEEICTLVIAETFPEDAG
IFTCTARNDYGSVSCSAQLTVLSANNTHTRNNVSSEEISGYDSQKPSPLSAVPNSSCLEM
SSKKNSECFQTSQTDSEANMEKSHFQFYPVENNSNGLHANNGVNGDSNNVDSKYISVTSP
CTFSPVKEPPPVPAKPKLDTQIIQQLQNQIRLEQEGAVWKQGSVQLNTPPSPSFPPPPSF
QELEASQLITSPEQMNVLNSHNSPMQPASSFNYARPKQFIAAQNMSPTSGYISPSSGSST
SSLPSPMSPSTPQKQFGRAPVPPFSQPFPQEGEQFWSPASSSPPPPPPPVLSPTANYSVV
DAFPLPPPPPPPLPVSVLSPSYSPSPSPTGRAPNSSQSPAAFISSMLPTQSSPITFNELG
LPKGVMPPGFPKKSSRTARIASDEEIQGTKDAVIQDLERKLRFKEELLNNGQPKLTYEEK
MARRLLGADSAATVFNIQEPEEDGNAQEVDSLDASVESPLDTQKEYKVSSFEQRLISEIE
YRLERSPVEESDEEVEHGDEPVDNGEAPQFETKLKHYKIFEGMSSTFTCKVTGNPKPKIY
WFKDGKQISKRSEHYRIQREPDGTCSLHTSASSLDDDGNYTIMAANPQGRISCTGRLMVQ
AVNQRGRTARTPTSQLHVRRPRSRSRDSGDENEPIQERFFRPHFLQAPGDLIVQEGKLCR
MDCKVSGLPTPDLSWQLNGRPVRPDNSHKMLVRENGVHSLVIEPVTTRDAGIYTCVASNR
AGQNSFTLELIVAAKDAHKPPVFIDKLQNTGVAEGYPVRLECRVSGMPPPQIFWKKENES
LTYSTERVSMHQDNYGYLCLLIQGATKEDAGWYTVSAKNEAGIVSCTARLDVHTQWHQQS
LAPKTRKVRPSASRYAALSDQGLDIKAAFLPEANPVHLQPALVESEDL
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaattctagatcaagctctgcctcttccgttaatgctcaaaaactcctac
ccaaatgaaacagctatgcaagaaagcctctcgggaaacatttcggaagcatcctcgcat
gactccttctatgattcattctcagatttgaatgatgagcctgccgatgccaatttccca
gaactctctgccttccttagtcaagatgagatgaacaagagtcttgacattgcacgtgaa
gctttttctggctctgaacatgaggaatcattccaagaacattttgcaatccccgctccc
ttaaaaacaaaggatagttttaaggatcttaaactgagcaacccagaatcattacgaaaa
caggataatataatacgtaacaatgtgcacaataaccaaaatactcttcctattacttcc
tgcaaagtcgttgctactgatgtgcgtaaaatgatatcaccattgttaacaactagtcca
agtataatcagaactctgcaagcccaaaaagcttccaaaaacatgggcaaatgtgatata
agtaaaacacccatcccaaaaaccagagcaaaagctttccatggggaatctggcacacag
aacaacgagtgcacaaaggcagctacttttattgatgagctttctgcaatatttcgagaa
actaccaaagctagaaacaggaggacaaacggcgattcctcttcaccagatagtggttat
ctgtcgcctaaaaaagacatgccgattaatatgacttcttcagtgaatgaaaacgaagtt
gaaattaagcaggaattaaaacctaaagatagacaatgcattaaagagattaagaacagt
tttcatgaaatccagagccaatccaaccagcctgaagaaaaggttatccatggtagacaa
tgtattaaaggcatggagaacagttttcaggaaatccagagccaatccaaccagcctgaa
gaaaaggttatccacaataaacaatttattaaagatatggataacagttttcagaaaatt
cagagccaatacaaccagcctgaagaaaagattatacagagtagacaatgtaataaaggt
atggagaacagttttcaggaaatccagagccaatccaaacagcctgaagaaaaggttatc
cacaataaacaatttattaaagatatggataacagttttcagaaaattcagagccaatgc
aaccagcctgaagaaaagattatccagggtagacaatgtattaaagagatggagaacagt
tttcatgaaattcagagcctatccaaacaacctgaagaaaaggttatccagagtagagag
tgtattaaagggatggagaacagttttcatgaaattcagagcctatccaaccagcctgaa
gaaaaggttatccagggtagacagtgtattaaagggatggagaacagttttcatgaaatc
cagagcctatccaaccagcctgaagaaaaggttatccagggcagaaagtgtattaaaggg
atagagaacagttttcagaaaattcacagtcaatccaacctgcctgaagaaaaggttatc
catggtacagccaataaatcagttaatcctccggcagctgctcgatttattcagaagctc
agaagccaagaagttgctgagggaagtagagtcaaactagaatgcagagcaacaggaaat
ccgttgccagaaattaggtggttctgtgaaggaaaggagctgagtaactcacccgacatt
catatctcatctgatagcaacggtcttcacaccctagtcatcgcagaggcttttgaagaa
gacacaggacgatatacttgtgtggcatccaattgccttggttctgacacatcatcagca
gaaatatttgttgaaggtgccagctcatcagactcagaaagtgaaagttttgcttttaaa
tcaaaacaaggagcaatgccgcaggcacaaaagaaaacatcttcggtttccttgacgata
ggcccatcttctccaaaatgtggtataacaactgcagtaatgcagccaatttccatacct
gttcagcaggtcagaagtcctacatcctacctataccaagacagatccaagacacccact
ttctgtgctccagcatttacaaaggagctgcaaaacctgacagcatcggaggggcaggtt
gtagttctggagtgcagagtgaagggaacaccccctgtaaaggtcaaatggttcagacaa
ggatctgaaatacaggattcacctgacttcagaattctacagaaaaaacctcgttgtgcg
tcggagcctgaggagatctgtacccttgtcatagctgagacttttccagaagatgcgggc
attttcacttgtacagcaagaaatgattatggatcggtttcttgcagtgctcagctaaca
gtcctctctgcaaacaatacgcacactagaaataatgtgtcaagcgaagaaattagtggt
tacgattcccagaagccgtcgccactttctgcagttcctaacagtagttgtcttgaaatg
tcatccaagaagaattctgagtgctttcagaccagccaaacagactcagaagccaacatg
gaaaaaagtcacttccagttctatccagtggaaaacaatagcaatggcttacatgctaat
aatggagttaatggtgacagcaataatgtggacagcaaatatatatctgtcacttctccg
tgcacattttcgccagtcaaggaaccacccccagtgcctgcaaagccaaaactggatact
caaataatacagcagctgcagaaccagatacgtctagagcaagaaggtgccgtttggaaa
caaggaagtgttcagctaaatacgccaccatcaccatcttttcctcctccaccgtctttc
caggagctggaggccagtcagcttatcacttccccagagcaaatgaatgtccttaactca
cataattctccaatgcagccagcaagctcattcaactatgccaggcctaaacagtttatt
gctgctcagaacatgagccccacctcaggctacatttctccatcttctggttcctctact
tctagcctaccatcaccaatgtcaccctcaactcctcagaagcaattcggcagggctcca
gttcctcctttctctcagccatttccccaagagggagaacagttttggtccccagcctca
tcatctcctccgcctccccctcctcctgttttaagtccaactgcaaattattctgttgtt
gatgcatttccacttccaccacctccaccaccaccacttccagtttctgtactttcacct
tcctatagtccatcaccttcaccaactggcagagcgcccaattccagtcagagcccagca
gcttttatcagttccatgctgcctactcagtcatcaccaattactttcaatgaacttggg
cttcctaaaggtgtaatgcctcctggtttcccaaagaaatccagccggactgctcgcata
gcatcagatgaagagatacagggcacaaaggatgctgtcatacaagatcttgagcgaaag
cttcgtttcaaagaggagcttctgaacaatggccagccgaaattgacttatgaggagaaa
atggctcgtcggttgcttggtgctgacagtgcagcaacagtgtttaacatccaggaacca
gaggaggatgggaatgcgcaggaagttgactctcttgatgcttctgtagaaagtcctctt
gacactcaaaaggagtacaaagtctccagctttgagcagagattaattagtgaaattgag
taccgtttggaacgatcccctgtggaagagtctgatgaagaggtagagcatggagatgaa
ccggtggataacggggaagccccacagtttgagacaaagctaaaacattacaaaatcttt
gaaggaatgtcatccacattcacttgcaaggttacaggcaatccaaagcccaagatatat
tggttcaaagatgggaaacaaatctcaaaaagaagcgaacactataggattcagagagaa
cctgacggaacctgctcccttcatacctcagcctcctcattggatgatgatgggaattac
actataatggcagcaaatccacagggcagaataagctgtactgggaggttgatggtacaa
gctgtaaaccagagaggaaggactgcccgtactccaacatcccagctccatgttagaaga
cctcgatctaggtcaagagatagtggagatgaaaatgagcctatccaagagagattcttc
cgccctcacttcttgcaggctccaggagacctcattgttcaggaaggaaagctctgcagg
atggactgcaaggttagtggcttgccaacaccagatctcagctggcaactgaatgggaga
cctgtccgtccggataactcgcacaaaatgctggtgagggagaatggcgttcactcattg
gttattgaacctgtcaccactagagatgctggaatatacacctgcgttgcctcaaatcgt
gcagggcagaactcattcaccttggaactcattgttgcagccaaggatgcccataaaccc
cctgtgtttatagataagcttcaaaatacaggcgttgcggagggataccctgtgaggctg
gagtgccgtgtcagcgggatgccccctccacagatattctggaagaaggagaacgaatcg
ctgacctacagcacagaaagagtcagcatgcatcaggataactatggctacctgtgccta
ctaattcagggtgccacaaaggaggatgctggttggtatactgtgtcagcaaagaatgaa
gctggtattgtgtcctgtactgccagactggacgtacacactcagtggcatcaacagtct
cttgccccaaagacaagaaaggtacgtccatcagccagtcgctatgcagcactttctgac
caaggcctggacatcaaagctgctttcctgcccgaagcaaaccctgtgcacttacagcca
gcactggtagaaagtgaagatctgtag
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