Xenopus tropicalis (tropical clawed frog): 100144714
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Entry
100144714 CDS
T01011
Symbol
rangap1
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100144714 (rangap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100144714 (rangap1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100144714 (rangap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CDC45
CRS1_YhbY
YL1
BUD22
Tim54
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
100144714
NCBI-ProteinID:
NP_001116940
Xenbase:
XB-GENE-489955
UniProt:
B1H2L8
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Position
4:complement(121799002..121814206)
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AA seq
582 aa
AA seq
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MASEDIAQLTDSLAKTKVEGGGELSFKGKSLKLNTAQDAEEVIREIEDFEGLHALRLEGN
TVGLEAAKAIAKVLEKKPDLKRCHWSDMFTGRLRSEIPPSLISLGDALITAGAQLTELDL
SDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECYKKSSSHGKP
LALKVFIAGRNRLENDGATALAEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLK
VINLNDNTFTEKGGIAMAEALKTLRQVEVINFGDCLVRSKGAQAIATALKEGLHKLKELN
LSFCEIKRDAAVVLAESVEDRSELQKLDLNGNCLGEGGCEQVQEILEGISMANILGSLSD
DEGDEDEDEDEVDDDDDDDDDDDDEDDEEDVEEEEEEEDVDDNENRTKPNKISSHVSTPA
APPKLPVDASTFLSFPSPEKLVRMGPKRSTMIMQQIDVADTEKVVQTFIQVSSVYRDDSE
VKAAVEETIDGLMKKAFESRGFQENLFITSLLVHMGLLKSEDKIKTVQHLNGPLLTLNHM
VQQNYFPKSLVPILLAFISKPNRVLENNASARHTLLHNLHNL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaagatattgcgcagttgacagattccctggcaaagacaaaggtggaggga
ggaggagagctaagctttaaagggaaaagcctgaaactcaacactgcccaggatgctgaa
gaagtgattcgggaaattgaagattttgaagggctgcatgctctgcggctggaaggcaac
actgtgggactggaggcagctaaagcaatagccaaagttctggaaaagaaacctgatctg
aagcgctgccactggagtgatatgtttacaggaaggttaaggtccgaaattccaccttct
ttgatatctcttggtgatgctttgattacagctggagctcagctgaccgagctggattta
agtgacaatgcttttggtcctgatggagtgcgtggttttgaagctcttcttaagagtcca
gcttgtttcactctacaggagctcaaactgaacaactgtggaatgggaattggtggagga
aagatcctggctgcagccctaactgagtgttacaagaagtctagttcccatggtaagcct
ctggcactgaaagtattcatagcaggaaggaaccgcttggagaatgatggtgccactgca
ctggctgaagcttttcgtctcattggcaccttagaggaggtacacatgccgcagaatggc
attaatcatgctggcatcactgctttggcagaatcttttaaagccaactctttgctgaaa
gtgatcaaccttaatgataatacattcacagaaaagggtggcattgctatggctgaggca
ttaaagacactcaggcaagtggaagtaatcaattttggggactgtttggtccgttccaag
ggagcacaggctatagcaactgcattaaaagaagggcttcataaattaaaggagcttaac
ctctctttttgtgaaattaaacgagatgcagcagtggtcttagcagaatctgtggaagat
aggtctgaattacagaaactggatttaaatggaaattgtcttggtgaggggggctgtgag
caggtgcaggaaatcctggaaggcattagcatggctaacatattaggctctttaagtgat
gatgagggggatgaagatgaggatgaagatgaagtagatgatgatgacgacgatgatgac
gacgacgatgatgaagatgatgaagaggacgtggaggaggaggaagaggaggaagatgta
gatgataatgaaaacagaacaaagcctaataaaatttcatcacatgtatccacaccagcc
gctccacctaaacttccagttgatgcatccacctttcttagctttccctctcctgagaag
cttgtgcgcatgggtcctaaacgttctacaatgataatgcagcagatcgatgttgcagat
acggaaaaggtggtccaaacgttcatccaggtctcctctgtgtacagggatgacagtgaa
gtaaaggcggctgttgaagaaactattgatggtctaatgaagaaggcttttgaaagccga
ggtttccaagaaaatctgtttatcactagtctattggtgcatatgggacttctcaagagt
gaagacaaaattaaaacggtacagcacttaaatggccccttgctaactctgaatcacatg
gtacaacagaattacttcccaaaatctcttgttcctatacttctggctttcatctcaaag
cccaaccgtgtcctggaaaataacgccagtgccagacacacattgctgcacaaccttcat
aatctgtaa
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