Xenopus tropicalis (tropical clawed frog): 100144731
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Entry
100144731 CDS
T01011
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100144731 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100144731 (arih1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100144731 (arih1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100144731 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_2
zf-RING_14
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100144731
NCBI-ProteinID:
NP_001116952
Xenbase:
XB-GENE-972160
UniProt:
B1H1E4
LinkDB
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Position
3:92157806..92195058
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AA seq
529 aa
AA seq
DB search
MDSDEGYNYEFDDEEECSEDSGADEHEDDLELGEVELVEAGLSGSERAGICGEGGGSALG
PGPGGEEEEDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMER
YFDGNLEKLFSECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFC
MQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQH
NMSWIEVQFLKKAVDVLCQCRSTLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGY
LERDISQDSLQDIKQKVQDKYRYCESRRRVLLLHVHEGYEKDLWEYIED
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaaggatacaactatgaatttgatgatgaagaggagtgcagtgaggac
agtggagctgatgaacatgaagatgatctggagcttggagaagtggagctggtggaagct
gggcttagtggatcagagagagctggtatatgtggagaaggtggtggaagtgcccttgga
ccaggtccaggtggcgaggaggaggaggactatcgatacgaagttctcactgctgagcaa
atcctccagcacatggtggagtgtattcgtgaagtcaatgaagtcatacagaatcctgct
actataactagaatacttctgagtcatttcaactgggacaaagagaagctgatggagagg
tattttgatgggaaccttgaaaagctcttctcagaatgtcatgtcattaaccccagtaag
aagtcgcggacacgccagatgaacacacggtcatctgcacaggacatgccctgccagatc
tgctatttgaattatcctaattcatatttcacaggccttgaatgtggtcacaagttctgc
atgcagtgctggagcgagtatttgaccactaaaatcatagaggaaggaatggggcagaca
atctcatgccctgctcatggttgtgacatcttagttgatgacaacacagtaatgcgcttg
ataactgattcgaaagtgaagttaaagtatcaacatttaattactaatagctttgtagag
tgtaacagacttttgaagtggtgccctgctccagattgccaccatgtggtaaaggttcag
tatcctgacgcaaaacctgtgcgctgcaagtgcggtcgacagttctgctttaactgtgga
gaaaattggcatgacccagttaaatgtaagtggttaaagaaatggattaagaagtgtgat
gatgacagtgaaacatcaaattggattgcagctaataccaaggagtgcccaaaatgtcat
gtgacaatagagaaggatggaggttgcaatcacatggtatgccggaaccagaattgcaaa
gcagagttctgctgggtttgcctgggtccatgggagcctcatggttctgcttggtataat
tgtaaccgttacaatgaggatgatgcaaaggctgctcgagatgctcaagagagatcccgc
gcagcattacaaagatatcttttctactgcaaccgctacatgaatcacatgcaaagcctg
cgatttgagcacaagttgtatgctcaagtgaagcaaaagatggaggagatgcagcaacac
aacatgtcatggatcgaggttcagttcctaaaaaaggcagttgatgtgctgtgccagtgt
cgctccacactaatgtacacatatgtctttgccttctacctcaagaagaacaaccagtct
attatatttgagaataatcaagcagatttagagaatgctacagaggttctatctggatat
ttggagagagacatttcccaggactcgctgcaagacataaaacagaaagtgcaagacaaa
tacagatactgcgagagcagaaggcgagtcttgctgcttcatgtgcacgaaggttatgaa
aaggacttgtgggaatatattgaggactga
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