Xenopus tropicalis (tropical clawed frog): 100144739
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Entry
100144739 CDS
T01011
Symbol
cyld
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04217
Necroptosis
xtr04622
RIG-I-like receptor signaling pathway
xtr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100144739 (cyld)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100144739 (cyld)
04625 C-type lectin receptor signaling pathway
100144739 (cyld)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100144739 (cyld)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100144739 (cyld)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100144739 (cyld)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C67
100144739 (cyld)
Ubiquitin system [BR:
xtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100144739 (cyld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
100144739
NCBI-ProteinID:
NP_001116960
Xenbase:
XB-GENE-1032935
UniProt:
B1H1A4
LinkDB
All DBs
Position
4:complement(51204827..51237042)
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AA seq
974 aa
AA seq
DB search
MSGALWGQEKSSSSYWEERIFYLLLQEASVLDKQTQKQIKVPRGSIGQYVQERSAVAHSR
GITSSKSKKLQIALKILDQSHALLIMDEKEVYEIGEKMAELLLAITNCEERYSLFKNKAR
LTKAMQIEPGSAVRVCLRPGEIFPGVVRYRGPLLPDRSPNGIWFGVELLEDGRGQGFTEG
SYQGKQHFRCDEECGVFVAVDKLELCEDDDEDIESDYASPADNSQSEIPPLEINSRVSLK
IGEGMEFGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDIIPESITQDRRPLKLAYMSRCGSEKNLSSHSKPKVTGSTSESGSRTRSEFFYTLNGSS
VETQHQSKSKNTWYMDEARERSSRGSSGVQENSRCETVEDSAKSLTDSSHAAFGHCSPPL
QPSASSNSPGENRFHSLPFSLSKMSSTNGTMGHTPLSLSVQSVIGELNNVSLQDIPPRFT
HISNLHGLEVGSLAEVKENPPFYGVIRWIGQPAGVNEMLAGLELEDECAGCTDGTFKGTR
YFTCAPKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEGNTPPRTEKE
GLEVMIGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDSVLLRPKEKTDVEYYSETQALLRT
EIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKI
RSAGQKVQDCYFYQIFMDKNENVGVPTIQQLLEWSFINSSLKFAEAPSCLIVQMPRFGKD
FKMFNKIFPSLDLNITDLLEDTPRQCRICGGLAMYECRECYDDPDITAGKIKQFCKICNT
QVHLHPKRQHHKFNPVSLPKELPDWDWRHGCIPYQKMDLFAVLCIETSHYVAFVKYGRDD
SSWVFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEELHALDSRNIQGCARRLLCDA
YMCMYQSPTMSLYK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagctctctgggggcaagagaaaagcagctcttcttactgggaggagcgtatt
ttttacttgctgctccaagaggccagtgtgcttgataaacaaacccaaaagcaaatcaaa
gttcccagaggcagcattggccagtatgttcaggaacgatcggccgtggcacatagcagg
ggcataacttcctctaaaagcaaaaagttgcagatagcactgaagatcctggatcagtct
catgctctcttgattatggatgagaaagaagtttatgaaatcggggaaaaaatggctgag
ttgcttttagccattacaaactgtgaggaaaggtacagcctcttcaagaataaggcaaga
cttacgaaagccatgcagatagagcctggctctgcagtgcgggtgtgtttaaggcctgga
gaaatctttcctggagttgtacgttacaggggacctttgttaccagataggtctcccaat
gggatatggtttggagtagagttactggaagatggacggggccaaggttttacagagggc
tcctaccagggcaagcaacatttcagatgcgatgaagaatgtggagtgtttgtagctgta
gacaagttagagctatgtgaggatgacgatgaggacattgagagtgattatgcatctcct
gcagacaacagtcagtcagagatccctcccctagagatcaattccagagtgtctttaaag
attggggagggtatggagtttggaactgttatattttgtgatgttctgcctggaaaagaa
agtcttggatactttgttggagttgacatggacaaccctataggaaactgggatggaaga
tacaatggaattcaactctgtagctttgcaagtgttgagagcacccttcttctccatatt
aatgatataattccagagtccataacccaggacaggagacctctgaaattagcatatatg
tcgagatgtggcagcgaaaaaaacttgtccagtcatagcaaaccaaaggttacaggatct
acctcggagtcaggaagccggacacgttcagaatttttttatacgttaaatggaagttcg
gttgaaacacaacaccagtcaaagtcaaaaaatacttggtacatggatgaagcccgtgaa
agatcctccaggggaagttctggtgttcaggagaacagccgctgtgagactgttgaagac
tctgcaaaatcgctaacagattcatcccatgctgcgtttgggcattgttctcctcctctt
caaccttctgcaagtagcaattctcctggtgaaaacagattccactccttgcccttcagc
ctctctaaaatgtccagtaccaatggaacaatgggtcatacccccctctctttgtctgtg
cagtctgttattggagagcttaacaatgtatcccttcaggatatcccacctaggtttact
catatatcaaacttacatggtctagaagtgggttcattggctgaagttaaggagaaccct
cctttttatggggtgatccgctggattgggcagcctgcaggagttaatgagatgctagct
ggactagaactggaggatgaatgtgcaggatgcacagatggcactttcaaagggacaaga
tatttcacttgcgcccctaaaaaagcactttttgtaaagctaaagagttgtcggccagac
tctaggtttgcatcgcttcaaccagtctccaaccagattgaacgatgtaattctttagct
tttggaggatacttgagtgaggttgtagaagggaacacacctccaagaacagaaaaggaa
ggactagaagtgatgatagggaagaaaaaagggatccaaggacattacaactcttgctat
cttgattcaacattattctgccttttttcattcagctccgtattagactcagttctcctg
agacctaaagagaaaacagatgtggagtattacagtgaaactcaagcacttttaaggaca
gaaatagtgaatcctctgagaatatacggatatgtttgtgcaacgaaaattatgaaatta
agaaaaattttggaaaaagtagaggcggcatcaggatttacatctgaggaaaaagatcca
gaagaatttttaaacattttgtttcatcacatactgagggtggatccattgctgaaaata
aggtcagcaggtcagaaggtacaggactgctacttctaccagattttcatggacaagaat
gaaaatgttggggtccccacaatacaacagcttttagagtggtcctttatcaacagcagt
ttgaagtttgcagaggctccctcttgtttaattgtccagatgcctcggtttggcaaagac
ttcaaaatgttcaacaaaatattcccttccttggatttgaacatcacagatttactggaa
gacactccccgtcagtgccgcatatgtggaggtcttgctatgtacgaatgcagagagtgc
tacgatgatccagatattactgcagggaaaattaagcagttttgcaaaatatgcaacacc
caggttcatctccatcctaaaaggcagcatcataaattcaacccagtgtctcttcctaaa
gaactcccagactgggactggagacatggatgtataccgtaccagaagatggacttgttt
gctgtattatgcattgagaccagtcactatgtggcatttgttaagtatggcagggatgat
tcttcttgggttttcttcgacagtatggctgatcgggatggtggccagaatgggtttaac
atcccacaagtcactccgtgtccagaggttggagaatacctgaaaatgtcccttgaagaa
cttcacgccttagattctcgaaacatacagggctgtgcaaggcggctcctgtgcgatgcc
tatatgtgcatgtaccagagccctactatgagtttatacaagtaa
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