Xenopus tropicalis (tropical clawed frog): 100145006
Help
Entry
100145006 CDS
T01011
Symbol
sdccag8
Name
(RefSeq) serologically defined colon cancer antigen 8 isoform X1
KO
K16488
serologically defined colon cancer antigen 8
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100145006 (sdccag8)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100145006 (sdccag8)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100145006 (sdccag8)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100145006 (sdccag8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
USHBP1_PDZ-bd
ATG16
NYD-SP28_assoc
SlyX
Orthopox_F7
DUF948
Motif
Other DBs
NCBI-GeneID:
100145006
NCBI-ProteinID:
XP_012819174
Xenbase:
XB-GENE-953338
UniProt:
F6XA00
LinkDB
All DBs
Position
5:complement(57187303..57329370)
Genome browser
AA seq
651 aa
AA seq
DB search
MTDNSLEVYPYKSNNEQFITGLPSGELQQSQAVSQLKTLLKIHEQEYEDSPPMQRRTSTS
RPLKTGEEKSVAINDLVPIIQDQSQYIQHLEAEVKFCKEELSSMKHRVQLVVLENEELHV
HISRMAQTGLREQTVLDSSTDSMTANRKHQNDIAYQSPLSSTNVLEEQKWQKELERLQCL
HQAKIETLESQIKYLRKDLADSQKNCEELQNKLKKQETSFTGSQNSVDEGGLCVKCANVS
VYKISIERLTRERDELVDALLSLKKSQILWQQRELKPYNQVKHAVEMTEEANLKKTKALV
NCEQLRREIERKNAQFEKEVNIQFEKMSAEKQEIREEAKKEREQLLTMITSLSENASTLE
SQLKRVTREKNELVRELEEIQQKLAFQEEKTAKVCAEMCFQLNQIKMKKEEAEKEHKEYR
IKNLKDLDIKNKEIEKHELQLNKNKQWLEQAQLDATRAKDECLRLTELLGNAEHQLHLTR
LEKDDIQQRLSSEVRSLAFQTQKCEQELKQKMQQMEAQHDQMVNEMVLLMASQNTLISRL
KKECNVLAKQLEHVTERNRSDVQVICHENVHAHNRIEELLKREDELEAQCIQHGKMHERM
KARLQELDKHCMNSALRIVNLLDKYNELMEERQLLIEEVQALKKQKIQMAH
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactgataactctttagaagtgtatccatataaatcaaataatgaacagtttataact
ggacttccatcgggagagctacagcagagtcaagcagtaagccaactaaaaactttgttg
aaaatacatgaacaggaatatgaagactctccacctatgcaaagaagaacgtccacatcc
agacctttaaaaactggagaagaaaagtcagttgccatcaatgaccttgttccaattatt
caagaccagtcccaatatatacagcatttagaggctgaagtgaaattctgtaaggaggag
ttatcctctatgaaacatcgagtgcaattagttgttctggaaaatgaagagctccatgta
cacatctctagaatggcacagactggtctaagagagcaaacagtgttagactcatctacg
gactctatgactgcgaacagaaaacaccagaatgatattgcataccagtctccactttca
tcaacaaacgtcttagaagaacagaaatggcaaaaagagctagagagactccaatgcctg
catcaagccaaaattgaaactctggaatcccaaataaaatatttgaggaaggatttggca
gactcacagaaaaactgtgaagaattgcaaaacaagttgaagaaacaagaaacaagtttc
actggttctcaaaattctgtggatgagggtggtctttgtgtaaaatgtgcaaatgtttca
gtgtataagatttctatcgaaaggcttactcgagaaagagatgaacttgtggatgcctta
ctttctttgaaaaaaagtcaaattttatggcaacagagggaattaaaaccttacaatcaa
gtaaaacacgcagtggaaatgacagaagaggcaaatttgaaaaaaacaaaggctttagtc
aactgtgaacagttaagaagagaaatagaaagaaaaaatgcacagtttgagaaagaagta
aatatccagtttgaaaagatgtctgcagaaaaacaagaaattagagaagaagcaaagaag
gaaagagagcaattacttacaatgatcacatcattatctgaaaatgcatcaacacttgaa
agccaattaaagagggttacaagagagaaaaatgaactagtaagggagctggaagaaatt
cagcagaagcttgcctttcaggaagaaaaaactgctaaggtgtgtgcagagatgtgcttt
cagctaaatcagatcaaaatgaagaaagaagaagctgaaaaggagcacaaagaatacaga
ataaaaaatctgaaggatcttgatattaaaaataaggaaatagaaaagcatgaattgcag
ttgaataaaaacaagcaatggttggaacaagcccagctggacgcaacaagagccaaagat
gagtgtctgagactgacagaactgctgggaaatgctgagcaccaactgcacctcaccagg
ttggagaaagatgatattcagcaaagactcagcagtgaagtaaggtcattggcctttcag
acccagaaatgtgaacaggagctaaaacagaagatgcagcaaatggaagcccagcatgac
caaatggtgaacgaaatggttttgctgatggcatcacaaaatactttgatatctagactg
aaaaaggaatgcaatgttcttgcaaagcaactggagcatgtaactgaaagaaacaggtct
gacgtacaagttatttgtcatgaaaatgtacatgcccataacagaatagaagaactgttg
aagagagaggatgaattggaagctcagtgtatccagcatgggaaaatgcatgaaagaatg
aaggcaagactgcaagaacttgacaagcattgtatgaatagcgccctaaggattgtcaac
ctccttgataaatataatgagctaatggaggaaaggcagttgctaatagaagaagtccag
gccttaaaaaaacagaaaattcaaatggctcattag
DBGET
integrated database retrieval system
