Xenopus tropicalis (tropical clawed frog): 100145091
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Entry
100145091 CDS
T01011
Symbol
puf60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100145091 (puf60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100145091 (puf60)
Spliceosome [BR:
xtr03041
]
Complex A
U2 snRNP components
U2 related factors
100145091 (puf60)
Complex B
100145091 (puf60)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
100145091
NCBI-ProteinID:
NP_001120082
Xenbase:
XB-GENE-5785623
UniProt:
B0BMQ2
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Position
6:complement(153312935..153331365)
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AA seq
507 aa
AA seq
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MLSVDSIKLENGQSTSAKLGLPPLTLEQQEALQKAKKYAMEQSIKSVLVKQTIAHQHQQL
TNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGF
AFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARSFNRIYVAS
VHQDLSDEDIKSVFEAFGKIKSCMLARDPTTGKHKGYGFIEYEKGQSSQDAVSSMNLFDL
GGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLASPG
LVTPALTLAQPLGALPQAVMAAQAPGVITGVTPVRPPLPVTIPPVGLVNPLLSSPPTLAQ
LEVKKEKEEEEILPESERPEMLSEQEHMSISGSSARHMVMQKLMRKQESTVMVLRNMVDP
RDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMSSETQKAIQAL
NGRWFAGRKVVAEVYDQERFDNSDLSA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgttgactccatcaagctggagaatggacagagcacctcagcaaaactggga
ctcccacccctcacactggagcagcaagaggcgctgcagaaggccaagaagtatgcgatg
gagcagagcatcaagagtgttctggtgaaacaaacaattgcacatcaacaccaacagctc
accaacctacagatggcggcgcagaggcagcgtgccctggccattatgtgccgcgtctac
gtgggctccatctattacgagctgggggaggacaccatccggcaggccttcgctccattt
gggcccataaagagcatagacatgtcctgggactcggtcacaatgaagcacaagggattc
gccttcgtggagtatgaagtgccagaagcggcccagttggcgctggagcagatgaactct
gtgatgttgggtggcaggaacataaaggtgggccgacccagtaacatcgggcaggctcag
cccattatagaccagctggcggaggaggcgcgttccttcaaccggatctacgtggcctcc
gtgcaccaggacctgtccgacgaggacatcaagagcgtgtttgaggcattcgggaagatt
aagtcctgcatgttggctcgtgatcccaccaccggcaaacacaagggctacggctttata
gagtatgagaagggccagtcctcgcaggatgccgtctcctctatgaacctctttgatctg
ggtggtcagtaccttcgagttggaaaggccgtcacacccccaatgcccctgctcacaccc
gccacacctggtgggctgccccccgcagcggccgtagctgcagcagctgcgactgctaaa
attacagcacaggaagctgtagcaggagctgccgtcctcggaacccttgccagccctggc
ctggtaacgcctgcactgacactcgcacagcccctgggggcactacctcaggctgttatg
gctgcacaggcccctggggttattacaggtgtgaccccagtgcgcccacccttgccagtt
accattcccccagttgggctagtgaaccctctgctttccagtcccccaacgttagcccag
ctagaggtgaagaaggagaaggaagaagaggaaattctgcccgagtcggagaggccagaa
atgctcagtgagcaggaacatatgagcatatcggggagcagcgcccgacacatggtcatg
cagaaactcatgcgcaaacaggagagtactgtcatggtcctgcgcaacatggtggatccc
cgtgatatcgatgatgacctggaaggggaggtaacggaggagtgcggcaaattcggcgcg
gtgaatcgagtgatcatttaccaggagaagcagggggaggaggaagacgccgagatcatc
gttaagatctttgtggagttctccatgtccagcgagacgcagaaagccatccaggcgctg
aatggacgctggttcgctgggcgcaaagtggtcgccgaggtttacgaccaggagcgattt
gataatagcgacctgtctgcgtga
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