Xenopus tropicalis (tropical clawed frog): 100145120
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Entry
100145120 CDS
T01011
Symbol
sptbn1
Name
(RefSeq) spectrin, beta, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100145120 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100145120 (sptbn1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100145120 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
100145120 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
100145120
NCBI-ProteinID:
NP_001362280
Xenbase:
XB-GENE-989148
UniProt:
A0A8J0QFZ2
LinkDB
All DBs
Position
5:24008003..24127541
Genome browser
AA seq
2358 aa
AA seq
DB search
MTAVATDFDNIEIQQQYSDVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFTK
WVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQF
LKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLW
CQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAE
QHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEK
MIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQQLQAFNTYRTVEKPPKFTEKGNL
EVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQ
LARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVLAVV
AVARELEAENYHDIKRITARKDNVIRLWEYLLELLKARRLRLEMNLGLQKVFQEMLYIMD
WMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVNASAQRFATGGEGYK
PCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILS
SDDYGKDLTSVVRLYCKHKAFEDEMSGRSGHLLQTIKEGEEMIAEDHFGSEKIRERIKDI
QEQWANLEHLSAIRKKRLEDTTSSYQFQADADDVDAWMLDILRIVSSSDVGHDEYSTQSL
VKKHKDVAEEIANYRSTIDALHEQAAALPEERFNSTDVQNRLSGIEERYKELAELARLRK
QALQDALTLYKMFSEADACELWIVEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQA
SRVAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRELVDKTKDALSSALSIQNYHL
ECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEAKLTDLQKEAEKL
EAEHPDQAQAIMDRLAEINNVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQ
TAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQ
RLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTELPNNLE
AAEAAIKTQEDFMTTMDASEEKINAVVDTGRRLVNDENINSDKIEEKVDSIDSRHKKNRA
GANDLLMRLKDNREMQKFLQDCQELSLWINEKMLTARDMSYDEARNLHSKWLKHQAFMAE
LASNKEWLDKIEKEGNQLIAEKPETEAIVKEKMSALHAMWEELESTTQTKAQRLFDANKA
ELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELRSQ
AQALSQEGKSTDEVDGQRQVVEVRFIELLAPLNERKKYLLASKEIHQFNRDVEDEILWVE
ERMPLATSTDHGHNLQTVQLLMKKNQTLQKEIQGHQHRNDDIFERSKMILDDSSLNAEAI
TQRLADLQALWSLLIEETEKRHRRLEESHRAQQYYFDGAEAEAWMSEQELYMMSEEKAKD
EQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVAEGHPESERISMRQSQVDKLYAGL
KDLSEERRGKLDERQRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREF
ARDTGHIGQERVDSVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAA
SFELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQL
QEDAARLQAAYAGDKADDIQKRESEVLEAWKALLDACDGRRLRLVDTGDKFRFFSMVRDL
MLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHY
ASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLFGQEPYLSSR
EIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRLQEEEERKRKPPTP
ELSPKLSEDGSPQQWDGTKEGEQISQNGLPSDQESPRMAENADTNELVNGSTEQRSSSKE
SSPIPSPTADRKSKSGMQPQTAATLPAKTQEMPSAQFEGFLHRKHEWEGHNKKASSRSWH
NVYCVINNQEMGFYKDSKNAASGIAYHNEIPANLKEAVCEVATDYKKKKHVFKLKLNDGN
EYLFQAKDDEEMNTWIQAITNAITSDKTEVSLSTQSTPASSRAQTLPASVTVTDSPGKRE
KDKEKDKEKRFSLFGKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggtcgcgacagacttcgacaacattgagatacaacagcaatacagcgatgtc
aacaatcgctgggatgatgagtgggacaatgagaacagttctgcccgcctgtttgagagg
tcccgcatcaaggccttagcagatgaacgtgaagctgtgcagaagaagactttcacaaaa
tgggttaattcccacttggccagggtgtcgtgccgcattactgatctctacgcagacctt
cgagatgggaggatgcttatcaaactactggaggttctctccggagaaagactccccaaa
cccaccaaggggagaatgcgcatccactgcctggaaaacgttgataaagctctccagttc
ctaaaggaacagcgggtgcatctggagaacatgggctcccatgacatcgtggatggaaat
cacaggctgacccttggtcttatttggaccattattctccgattccagatccaagatatt
agtgttgaaactgaggacaacaaggagaagaaatctgctaaggacgcgctgcttctgtgg
tgccagatgaagacagctggctatcctaatgtgaacatccataactttacaaccagttgg
agggacggcatggcattcaatgcacttattcacaaacacaggcctgatctaattgatttt
gataagctgaagaaatcaaacgcacactacaatcttcaaaatgcttttaacctggcagag
cagcaccttggccttacaaagctcctggaccctgaggatatcagtgtggaccatcctgat
gaaaagtccatcattacctatgttgtaacatactaccactacttctctaaaatgaaggct
cttgctgtggaaggcaaacgtattggaaaagtgcttgacaacgcaatcgaaaccgagaaa
atgattgagaaatacgaatctctggcctccgatcttctggagtggatcgagcagaccatc
atcatcctgaacaatcggaagtttgccaattctttaattggtgtacagcagcaattacag
gcattcaatacttaccgcactgtggagaaaccccccaaatttacagagaaaggaaattta
gaggtcttgcttttcactatccagagtaaaatgagggcgaataaccagaaagtgtacatg
ccaagggagggcaaactcatctcagatattaacaaggcctgggaaagactggaaaaagct
gaacacgagagagaactggcactgcgcaatgagctcatccgacaggagaaactggaacaa
ctcgcacgtcgatttgatcgcaaggcagctatgagggaaacctggctaagcgaaaaccag
cgtttggtgtctcaggataattttggttttgacctccccgctgtggaagcagccacaaaa
aagcacgaggccattgaaaccgacattgctgcctatgaagagcgcgttttggctgtggtg
gcggtcgctagggaactggaagccgaaaactaccatgatatcaaacgtatcaccgccaga
aaggataatgtcattcgcctgtgggagtatctgcttgagcttctcaaggcacgacgactg
cgccttgaaatgaacctcggcttacaaaaggttttccaagaaatgctttacataatggac
tggatggatgaaatgaaggtgctgttattgtctcaagattacgggaagcatctgctgggg
gttgaggacctgttgcagaaacatgccttggtggaggctgacattgccattcaagctgat
agggtcagagctgtcaatgcttctgcccagagatttgccactggaggagaaggttataaa
ccatgtgaccctcaagttattcgggatcgcgtggcccatatggagttttgttatcaagag
ttgtgtcagctggctgcagagaggcgggctcgtcttgaggagtccaggcgcctctggaag
tttttctgggaaatggctgaagaagagggctggattcgtgagaaggaacagattctgtcc
tctgatgactatggaaaggatttgacaagtgttgtacgtctgtattgcaagcacaaagca
tttgaggatgagatgagtggtcgaagtggacacctacttcagacaattaaagagggagag
gagatgattgccgaagaccatttcggttctgagaaaatacgagagagaattaaggatatt
caagagcagtgggcaaacctggagcacttgtctgcaataagaaagaaacgtctggaagat
accaccagttcctatcagttccaggcggatgctgatgacgttgatgcatggatgttagac
atcctgaggattgtatctagtagtgatgttggacacgatgagtattctacccagtcctta
gttaaaaagcacaaggatgttgctgaagaaattgcaaattaccgatcaaccattgatgct
ctccatgagcaggctgctgccctccccgaggagcgattcaattctacagatgtgcagaac
agattgtctggaatagaagagagatataaggaattggctgagctggctaggcttcgaaaa
caagctctgcaagatgccctgacactctacaaaatgttcagtgaagctgatgcctgtgag
ctctggattgtcgagaaggagcaatggctaaacaacatgcaaatccctgaaaaactagaa
gaccttgaagttattcagcacagatttgaaagcctggagccagaaatgaacaaccaagct
tctcgagtggctgtggtcaaccaaattgctcgccagcttatccacagtggtcacccaagt
gaaaaggaaatcaaagcacagcaggataaactgaacaccaggtggagtcagtttagagag
ctggttgacaaaacaaaggatgcactcagttcagcactcagcatccagaactatcatctc
gagtgcaatgagacaaagtcctggattagagaaaagaccaaagtaattgagtccacacaa
gagctcggcaatgacctggccggagttatggctctgcagaggaaactaactggtatggaa
cgtgatctggccgccattgaagctaaactgactgatctacagaaagaggcagaaaaactg
gaagctgagcatcctgaccaagctcaggctatcatggacagacttgctgaaattaacaat
gtgtgggaagaaatgaaaacaacattaaagaatcgggaagagtctcttggtgaggccagc
aagctgcagcagttcttgcgtgacttagatgactttcagtcttggctgtccaggacccaa
accgctatcgcatccgaggacatgccaaacacgctagcagaggctgaaaagcttctcact
cagcatgaaaacatcaagaatgaaatcaacaactatgaggaagactaccagaagatgagg
gacatgggcgaaatggtgacacaggggcaaacggatgcacaatacatgttcttgcggcag
cgccttcaggctcttgacactggatggaatgagcttcacaagatgtgggagaacagacag
agcctcctatctcagtctcacgcttatcagcttttcctaagagatacaaagcaagctgaa
gcttttctcaataaccaggaatatgtcttggcacatacagaactgcccaataacttggaa
gctgcagaggcggctataaagacgcaggaagacttcatgactactatggatgctagcgag
gagaagatcaatgcagtggtggacactggaagaaggctggtcaatgatgaaaacattaat
tctgataagattgaagaaaaggtggattcaatagatagcagacacaagaaaaatcgtgca
ggagcaaatgatctattaatgcgcctgaaagacaacagggagatgcagaagttccttcag
gactgtcaagagctgtccctgtggattaatgagaagatgctcacggctcgtgacatgtcc
tacgatgaggccaggaacctgcacagtaagtggctgaaacaccaggctttcatggctgaa
ttggcatcaaataaggagtggctggacaaaatagaaaaggagggaaatcagctcattgca
gagaaaccagaaacagaagctattgtaaaagagaagatgagcgctctgcatgcaatgtgg
gaagagcttgaatccaccacccagaccaaagcgcagcggctttttgatgccaacaaagct
gagctttttacccagagctgtgccgacctggataagtggctgcacggcctggagagtcag
attcagtcggatgattatggaaaagatctgaccagcgtgaacattctcttgaagaaacaa
cagatgctggagaaccagatggatgtgcgcaagaaggaggtagaggagctgcggagccaa
gcacaggcgctgagccaggaggggaagagtacggatgaagtggatggccaacggcaggtt
gtggaagtgaggtttatagaactgctcgcacccttgaatgaaaggaaaaagtacctgctg
gcttccaaggagattcaccagtttaaccgggatgtggaagacgaaattctttgggttgaa
gagaggatgccacttgccacatccacagaccacgggcacaatctccagaccgtacagctg
ctgatgaagaaaaaccagactcttcagaaggagatccagggccaccagcatcgtaatgac
gacatatttgagaggagcaagatgatcctggacgatagcagccttaacgcagaggcaatc
acacaaaggttggcagacctgcaggcactgtggagtctcttgatcgaagagacagaaaag
cggcacaggaggctggaggagtcgcacagggcacagcagtactacttcgatggggcagag
gcagaagcgtggatgagtgagcaagagctgtatatgatgtcggaggagaaggccaaggat
gagcagagcgctgtgtctatgttgaaaaagcaccagattttggagcaagcggtggaggat
tatgccgagactgtgcaccagctttccaaaaccagcagggcattggtggcagaaggtcac
ccagagagcgagcgcatcagcatgcgtcagtctcaggttgataaactttatgccggccta
aaagatctgtcggaagagaggagaggcaaactggatgagaggcaacggctgttccagctc
aatcgggaagttgatgacttggagcagtggatcgctgagagagaggtggtagcgggatct
cacgagcttggccaagactatgaacatgtaacgatgttacaagagcgatttagagagttt
gcccgggacaccggccatattggacaggaaagagtagactccgtcaaccacatggcagat
gatctcattaactctggacattctgatgcagccacaattgcagaatggaaagatggcctc
aacgaggcatgggctgaccttctggagctcattgacacaagaacacagatactggcagcc
tcttttgaactgcacaaattctaccacgatgctaaggagatctttggccgcatacaagat
aaacacaagaagctcccagaggagctgggcagagatcagaacacagtagagacgctacag
aggatgcatacaacgtttgaacatgatattcaggcactggggacacaggttaggcaactt
caggaagatgctgcccgactgcaggctgcttatgccggagacaaagccgatgatatccag
aagcgagagagtgaggtgctggaggcatggaaagcattactggatgcatgcgatgggcga
aggctgcgactggtcgacacaggggacaagttccgcttcttcagcatggtgcgtgatctc
atgttgtggatggaagatgtgatccgtcagatcgaggcccaagagaagccaagggatgtt
tcctcagtagaattactgatgaacaatcaccagggcatcaaggcagagatcgatgcccgc
aatgacagctttactacatgtattgagcttgggaagtctctcttggcaagaaagcactat
gcatctgaagagattaaggagaaactgctgcagctgactgagaagagaaaagaaatgatt
gacaagtgggaagatcgatgggaatggctgcgactaattctggaggtgcaccagttttcc
agagatgcaagcgttgcagaagcctggctgtttggacaagagccatacctgtcgagtcgg
gaaataggccagagcgtagacgaagtggaaaaactaattaagaggcacgaagcatttgag
aaatcggcagctacttgggatgaaaggttttctgctctggaaaggctcactacgttggaa
ctgttggaagttcgacggttgcaagaggaagaggagaggaaaaggaagccacctactccc
gaactgagtccaaagctttcagaggatgggtccccacaacaatgggatggaacaaaagag
ggagaacaaatatctcagaatggcttgccgtctgaccaagagtcgccacggatggctgag
aatgcagacaccaatgaactggttaatgggtccacagagcagagatcaagctccaaagaa
tccagtccaattccttcaccgactgctgatcggaaatccaaatccggcatgcagccacag
actgccgctaccctcccagccaagacgcaggaaatgccttccgcgcagtttgaaggtttc
ttgcaccgcaaacatgaatgggagggtcacaacaagaaagcttcaagcagatcttggcat
aatgtgtactgtgtgatcaacaaccaggaaatgggattttataaggattccaaaaatgct
gcatctggtattgcgtatcacaacgagattccagcgaatctgaaggaagcagtctgtgaa
gtcgcaactgattacaaaaagaagaaacatgtattcaaattaaagcttaacgatggcaat
gagtacctcttccaagccaaagatgatgaggagatgaacacatggattcaggccattaca
aacgcaattacgtcggataaaaccgaggtgtctctgagcacgcagagtaccccagcatcc
agccgtgcccagaccctcccggccagcgtaacggtaaccgacagccccggcaagcgggaa
aaggataaagaaaaggacaaggaaaagagattcagcctcttcggcaaaaagaagtga
DBGET
integrated database retrieval system
