Xenopus tropicalis (tropical clawed frog): 100145147
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Entry
100145147 CDS
T01011
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100145147 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100145147 (nhej1)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100145147 (nhej1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
100145147
NCBI-ProteinID:
XP_031749366
Xenbase:
XB-GENE-5750961
UniProt:
F7AXY0
LinkDB
All DBs
Position
9:complement(82987189..83050527)
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AA seq
303 aa
AA seq
DB search
MSFSQGTDAQLLQLPWRTLRIGDCTFLGKVCFAESGYALLLSDLSSVWCEEAEADAIQER
ARKLNKRLKAPVSSFLSYLSQIVFPALDSKDNGQNVFSCHRTEAELVLQVKSQLSGLPFY
WNFHCKEAKVSTVCRHLVNPLMSMAEALERQNQELYLLLGKKDAEIQEYQDSGAVLTRGR
LKTEVFDELKFQESFMAEKVQVLSKSGETHGFSEQLQRLYHALTAPAPVNPKGEDVGDSD
NLPPVAESNRENTNIPFGKTEPTQEGAGPETSQVPQSSLPCLTHRPPTAASKPKKKKAKG
LFT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcaaggaacggacgcccaactcctgcagctgccatggaggacgctccga
atcggagactgcactttccttgggaaggtttgctttgcagagtccggctatgccctgctc
ctgtctgatctcagcagcgtgtggtgtgaggaagcggaggccgacgccatacaggagcgc
gcgaggaaactaaacaagcgcctgaaagccccagtctcttctttcctctcgtacttgtcc
cagattgtctttcccgcgctggactccaaggataatgggcagaatgtcttctcttgtcac
aggacagaggcagagttggtgctgcaggtgaagagtcagctctctggccttcccttctac
tggaacttccactgcaaagaggccaaagtcagcacggtctgtcgccaccttgttaaccct
ctgatgtccatggcggaggcgctggagaggcagaatcaggagctgtacctgctgctgggg
aagaaagatgctgagattcaggagtatcaggacagtggagctgttctaacccgcggtcgg
ttgaaaacagaagtctttgatgaactgaaattccaggaatccttcatggcagagaaagtc
caggttctgagtaagtctggggagacccacggattcagtgagcagctccagcgactgtac
cacgctcttacggcaccggcaccggtaaatcccaagggagaagacgtgggagacagtgac
aaccttccccctgtggctgaatccaatagggaaaacaccaacattccatttgggaaaaca
gaaccaacacaggagggagcaggtccagaaacttctcaggtgcctcaatcttctcttccc
tgcctgacccatcggcctccaactgcagcctccaaacccaaaaagaagaaggcaaaggga
ctgtttacatga
DBGET
integrated database retrieval system
