Xenopus tropicalis (tropical clawed frog): 100145160
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Entry
100145160 CDS
T01011
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100145160 (vps35l)
Membrane trafficking [BR:
xtr04131
]
Protein recycling
Others
Retriever complex
100145160 (vps35l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
100145160
NCBI-ProteinID:
XP_012826281
Xenbase:
XB-GENE-5857341
UniProt:
F6W9V8
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All DBs
Position
9:31852895..31902541
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AA seq
963 aa
AA seq
DB search
MTQKMAAQWRSRERNYPEEFESWHLERVTVENEDYHPLKPIMVTESKTKKVGRKESTSSS
SSSCSSNSVADPLSSVLDGTDPLSLFAATAEPVASNVDGKRKKNENEEYVGSDFEPWSSK
RGEILARYTTTEKLSINLFMGSDRGKTTNAGSAVSEKVRTRLEELDDLEEGSQKELLNLT
QQDYISRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDT
FGKLVYERISSMCLDSRSSLPENFSPETVNDTAKETCLNWFFKIASIRELVPRFYVEAAI
LKCNKFLSKTGISESLPRLTTMIRGIGDPLVAVYARAYLCRVGMEVAPNVKESLNRNFFD
FLLTFKLIHSDTVQNQLAVQAVEIPVYLTLYSPAIDWMLRCIAYRAPETLLTEMMERCKK
QGNNALLLNSVMSAFRADFIATRSMDFIGMIKECDEAGFPKHLLFRSLGLNLALADPPEN
DRLQILNEAWKVITKLRNPQDYINCSEVWVEYTCRHFTKREVNTILADIIKHMTPDRAFE
DAYQQLQSVITKVITHFQDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIMEAFIRHQQEV
TKDPVILNALLHVCKTMHDSVNALTLEDEKRTLANLINGFIRMVSFGRDFEQQLSFYVET
RSMFCNLEPVLIQLIHSVNHLAMETKKVMKGNHSRKTASFVRACVAFSFITIPSLTSIFT
RLNLYLLSGQVALANQCLSQADAFFKAAVSLVPDVPKTISIDGKMRSSEPFLLEFLGNFF
STLLVVPDHPEQGVLFLVRGLLNVIEDYTWEDNSDDKVRIYTSVLHLLAALSQESYLLHV
DKVDSNDNLYGGDTKFLAEINRLCDTLIGQILEHLKTLGKEKTLKRQSYLALLFFNSILA
HGDLRNNKLNQLAVNLWNLAQRHGFADTKTMVKTLEYIKKKSKESEWSHFSDLAARLPLQ
SRT
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaagatggctgcgcagtggcgttcgagggaaagaaattacccagaagaattt
gagtcttggcacctggagagagtgactgtggaaaatgaggactatcatccactgaaaccc
atcatggtgactgaatccaagaccaagaaggtggggcgaaaggaaagcacgtcctccagt
tcatcatcatgctcatctaattctgtggctgatcctctcagcagcgtattggatggcaca
gaccctctgtccttgtttgcagcaactgcagagccagtggcatcaaatgtggatggcaaa
agaaaaaaaaacgagaatgaagaatatgttggaagtgactttgagccttggtccagcaaa
cggggagaaatccttgccagatacacaacaacagagaaactttccattaatctcttcatg
ggctctgacagaggcaaaaccacaaatgcaggctctgctgtttcagaaaaagtgagaacg
cgacttgaggaactcgatgaccttgaagagggatcacagaaagaacttttgaatttgacc
cagcaagattacattagtcgcattgaggagctaaaccaatcacttaaggatgcctgggca
tcagatcagaaagtcaaggctctgaagattgttatacagtgctctaaacttctctcagac
acaacagtgatccagttttacccaagcaaatttgtgttaattactgatatcctggacact
tttggaaaacttgtgtatgaacgcatctcctcaatgtgcttggatagccgatcttcatta
cctgaaaatttttccccagaaactgtaaatgacactgccaaagagacctgtctaaactgg
ttctttaagatagcatccatcagagaacttgttccaagattctacgtggaggcagcaata
ttgaagtgcaacaaatttctctctaaaacagggatatctgagagtcttccccgtttgaca
actatgatcagaggcataggtgacccactagtggcagtgtatgctagagcgtatctctgc
agggttggaatggaagttgctcctaatgtgaaagaaagtctgaaccggaacttttttgac
tttttacttacatttaaactaattcacagtgacacagtgcagaatcagctggcggttcag
gctgtagagattccagtttacctcacactgtactctcctgctattgactggatgttacgg
tgcattgcatatcgtgctccagagacgctgttaacagaaatgatggaacgctgcaagaag
caagggaacaatgccttgctgctgaattcagtaatgtctgctttcagagcagactttatt
gcaaccagatcaatggactttattggcatgattaaagaatgtgacgaggctggctttcct
aagcatcttctatttcgctcacttggattaaacctggctttggctgaccctcctgagaat
gacagacttcagattttaaacgaagcttggaaagtgatcaccaagttaagaaacccacag
gattacattaactgctcagaggtttgggttgaatatacatgcaggcattttacgaagcgg
gaggtgaatactatacttgcagatataataaagcacatgactcctgatcgtgcatttgag
gatgcatatcaacagttacagtcagtcataacaaaggttattactcatttccaagacttt
tctgtcctgttctctgtggagaagttccttccatttttggatatgtttcagaaagaaagt
gttagagtggaggtttgcaagtgcatcatggaagctttcatccggcatcagcaggaagtg
acaaaagatccagtcattctcaatgctcttcttcatgtatgcaagacaatgcacgactct
gtgaatgctctgacccttgaagatgaaaagaggacattggctaatctgataaatgggttt
atacgaatggtctcctttggacgggactttgaacaacagctgagtttttacgttgaaacc
agatcaatgttttgtaatctagagcctgtgcttatccagttaattcatagtgtgaaccat
cttgccatggagacaaaaaaggtgatgaaaggaaatcattcaaggaagactgcctcattt
gtcagggcttgcgttgccttctcctttataaccatcccatctctgactagcatcttcaca
cggctcaatctgtacctgctttcaggccaggtggccctggcaaaccagtgcctttcacaa
gcggatgccttttttaaagctgcagtaagccttgttcccgatgtcccaaagaccatcagt
atagatgggaagatgcggtcctctgaaccctttctcttggagtttcttggcaatttcttc
tccacattacttgttgttcctgatcacccagaacaaggagttctctttctagtacggggt
cttctaaatgtcatagaggattatacatgggaagataacagtgatgataaagtgcggatt
tacaccagtgttttacatctccttgctgcattaagccaagaaagctatttgcttcatgtg
gacaaagttgactctaatgataatctttatggaggagacaccaagttcctggcggaaatt
aaccgactttgtgatacgcttataggacaaattttggaacatctaaagacccttgggaaa
gaaaagaccctgaaacgtcagagttatttagccttgctgtttttcaacagcattcttgct
catggagatctaaggaataataaactcaatcagctggctgttaacctatggaatttggct
caaaggcatggctttgcagacaccaaaactatggtgaagaccttagaatacatcaagaaa
aaaagcaaagagtctgaatggagtcatttcagtgaccttgcagcaagactacctttacaa
tccagaacctag
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