KEGG T01011: 100145163

Xenopus tropicalis (tropical clawed frog): 100145163

Entry

100145163         CDS       T01011

Symbol

nxt2

Name

(RefSeq) nuclear transport factor 2-like export factor 2

K14285

NTF2-related export protein 1/2

Organism

xtr Xenopus tropicalis (tropical clawed frog)

Pathway

xtr03008

Ribosome biogenesis in eukaryotes

xtr03013

Nucleocytoplasmic transport

xtr03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:xtr00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100145163 (nxt2)
   03015 mRNA surveillance pathway
    100145163 (nxt2)
   03008 Ribosome biogenesis in eukaryotes
    100145163 (nxt2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xtr03019]
    100145163 (nxt2)
   03009 Ribosome biogenesis [BR:xtr03009]
    100145163 (nxt2)
Messenger RNA biogenesis [BR:xtr03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100145163 (nxt2)
Ribosome biogenesis [BR:xtr03009]
Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    100145163 (nxt2)

SSDB

Motif

Pfam:

NTF2 NXF_NTF2 Mtr2 SnoaL_2

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Xenbase:

UniProt:

LinkDB

Position

3:57304435..57309080

AA seq 140 aa
MVSSDFRTDVDLACRAAEEFVNLYYETIDKRRRQLIKLYTDTATLVWNGNPISGQDSLVE
FFEMLPSSEFQVNMFDCHPVHEQATQGQKTVLVVAHGIVKFEGNKHHYFNQNFLLSLHAT
PTNSVWKIASDCFRFQDWAG

NT seq 423 nt +upstreamnt +downstreamnt
atggtctcttcagattttagaacagacgtggacctagcatgcagggcagcagaagaattt
gtaaacctttactatgagaccattgataagaggagaaggcaactgatcaagctttacacg
gacactgcaaccttggtatggaacggcaatccaatctcaggccaagattctctcgttgag
ttttttgaaatgttgccatccagtgaatttcaagtgaatatgtttgactgccatcctgtc
catgaacaagctacacagggacagaaaacagttctggttgttgcccatggaatagtaaaa
tttgaaggaaacaagcaccattatttcaatcaaaactttctcctgagtcttcatgcgaca
ccaaccaacagtgtgtggaagatagccagtgactgtttccgcttccaggactgggcgggc
tga

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