Xenopus tropicalis (tropical clawed frog): 100145172
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Entry
100145172 CDS
T01011
Symbol
tcaf1
Name
(RefSeq) TRPM8 channel-associated factor homolog isoform X2
KO
K27948
TRPM8 channel-associated factor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
100145172 (tcaf1)
Peptidases and inhibitors [BR:
xtr01002
]
Metallo peptidases
Family M98
100145172 (tcaf1)
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GFIT
Motif
Pfam:
Peptidase_M60
M60-like_N
Retrotran_gag_4
Motif
Other DBs
NCBI-GeneID:
100145172
NCBI-ProteinID:
XP_002934606
Xenbase:
XB-GENE-5730808
UniProt:
A0A8J0QLN8
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Position
3:89959502..89974978
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AA seq
905 aa
AA seq
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MELFEDYKALTKDVGSLDFSGSSVPCKLLITGDMAFPVLVTPRKDVLIAASYYGKGKMVV
IAHENYLNMKEFMVFLRNSVTWLKPNPKAEIGVDGSLTLLAETLTGSGCQVQTSLSPAEG
LGVFCTSGYDDSQAQQIISFVREGGGLLIGAQAWHWSYSHKQENVLHNFPGNKITSVSGV
YFTDNYGEKGTFCVTDNMPWTPLYTDFDFSADMKHLLNGVSQLDISGYSLPSDLLIYGAL
AFPVGVADKKECFLGAAHYGKGRVVVASHDTYMYKPELKTFILNTISWLDTGKKNKIGIH
KDLENLAQLLEKEGILCTISSFSPELSVYCCPWYTEAEECAIHQFVAEGGGLFIGGQSWN
WASKNSDLNVVADFPGNKILNKFGISILDWSTPQGNYKAVNPDEATNQYRFPKALSQLQN
ELKSEHDLKPPFSTWMFKLRRDITYFMRLPASPIICAIQRQFIDMMQTCELPKLNGKNCV
SSCSKEALILSLAHEACNVNQECNEKNIMENEPAVTIEIDATNPGYDAWRSTGLYLSPKK
TAVLVFPASAVQQGLQVQVGCHSDDLGSKDEFYRAPIVVRKISVHREKVQVSCYWGGLLY
IIVKERSNLGTIPVQVYGAEPAPTYIKGKTSLDSWLQSLRDLPPPWAELITENIILTVPS
DAIRSLNDPEELLGFWDRMMVAITELAAIPTTFSRPERIVADVQISAGWMHAGYPVMVHL
ASVKYLTNLSCMQKEGLWGPIHELGHNQQQKVWEFPPHTTEATCNLWSVFVNETVVGVPR
DKANSALEPASRAACIEAYLKTGPKLENWNVWTALETYLQLQEGFGWEPFKQLFKDYQSM
SGISNDNKSKMNLWAEKFSEAVQTNLIPFFEAWGWPIEEETRSKLSALPVWEKDPMKPYL
SAMKS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagctttttgaagattacaaagcactcaccaaagatgttggttctctagatttctct
ggaagttctgttccatgcaagctgctaataacaggagacatggcattccctgtcctggtc
actcctagaaaggatgtgctcattgctgcctcttattatggaaaggggaaaatggtggtc
attgctcatgagaattatctgaatatgaaagagtttatggttttcttaaggaattctgtg
acctggctgaaaccaaacccaaaagcagaaattggtgtagatggcagcctaactctacta
gcagagacacttactggctctggctgtcaagtccaaaccagtttaagccctgctgagggc
ttgggagtgttctgtacaagtggatatgatgatagccaggctcagcagatcatctcattt
gtgcgagaggggggaggcctgctgattggggctcaggcttggcactggtcctacagtcac
aagcaggaaaatgttctccacaattttcctggaaacaaaataacatcagtttctggggtg
tacttcactgataattatggagaaaaaggaacattctgtgtgactgataatatgccatgg
actccattatacacagactttgacttttcagcagatatgaaacaccttttaaatggtgta
tcgcagctcgatatcagcggatacagcctcccctcagatcttctcatctatggggcactt
gcatttccagttggtgttgctgataagaaagaatgttttctgggtgctgcacactatgga
aaagggcgtgtggttgtagcatcacatgacacctacatgtataagccagagctgaaaacc
tttatcctaaatacaatatcatggctagacactggaaagaaaaacaaaattggtattcat
aaagacttggaaaaccttgcacaattgttagagaaggaaggcattttatgtacaatatcc
agctttagccctgagctgagtgtatattgctgtccatggtacaccgaggctgaagaatgt
gctatccatcaatttgttgcagaagggggaggcctatttattggtggccagtcctggaac
tgggcctccaaaaactcagatctaaatgttgttgctgatttcccaggcaacaaaatactg
aacaaatttggcattagcatcttggactggagcacccctcaaggcaattataaagcagtc
aatcctgatgaagccactaaccagtatcggttcccaaaggcactttcacagctgcaaaac
gaactaaaaagtgaacatgatctgaaacctccctttagcacctggatgttcaaactaaga
cgagatatcacctatttcatgaggctccccgccagtcctatcatttgcgccatacagcgc
cagtttatagatatgatgcagacctgtgagctacccaagctcaatggaaaaaactgtgtg
agcagttgctcgaaagaagctttaatcctatctttggcccatgaagcttgcaatgtgaac
caggagtgcaatgagaaaaatattatggagaatgagcctgcagtcacaatagaaattgat
gccacaaacccaggttatgatgcatggagaagcaccgggctctatttgtctcccaaaaag
acagcagtgcttgtgtttcctgcctcagctgttcaacagggtcttcaggtccaggttggc
tgtcactcagatgatttgggctctaaagatgagttttatcgtgcgccgattgttgtgcgg
aaaatttctgttcatagagagaaggtccaggtttcctgttattggggaggactcctttac
attattgtgaaagagaggagcaacttgggtacaatcccagttcaagtgtatggagcagaa
ccagccccaacctatataaaaggtaagaccagtcttgactcctggttgcaatcactccgt
gacttgcctcctccatgggctgaattgattacagaaaacattatcctgactgtaccatca
gatgctatccgctcactaaatgatccagaagaactacttgggttttgggacagaatgatg
gtagctattactgagcttgctgccataccgacaacattttctcgaccagaaagaatcgta
gcagatgttcagatctcagctggttggatgcatgctggatacccagtcatggtccactta
gcatcagtcaaatatctgactaaccttagctgtatgcaaaaggaaggtctctggggacca
atccatgagcttgggcacaatcaacagcaaaaagtttgggagttccccccacacactaca
gaagccacttgtaacctttggtctgtatttgtgaatgaaacagttgtaggagtgccccgg
gataaagctaactctgctctcgaaccagcaagcagggctgcctgtattgaggcatatttg
aaaactggacccaagttagaaaattggaatgtatggactgcactggagacctatctacag
ttgcaagaaggctttggctgggaaccattcaagcagttattcaaagactaccagagcatg
tcgggcatcagtaatgacaacaaatcaaagatgaacctgtgggcagagaagttctctgag
gctgtgcaaaccaatctcattccattctttgaggcctggggatggcccattgaggaagaa
actcgcagtaaattatctgcattacctgtatgggagaaggatcccatgaagccatatctt
agtgcaatgaagtcttaa
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