Xenopus tropicalis (tropical clawed frog): 100145189
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Entry
100145189 CDS
T01011
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor
KO
K23215
bcl-6 corepressor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100145189 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100145189 (bcor)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100145189 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
100145189
NCBI-ProteinID:
NP_001120151
Xenbase:
XB-GENE-1010841
UniProt:
B0JZE5
LinkDB
All DBs
Position
2:57314182..57412378
Genome browser
AA seq
1617 aa
AA seq
DB search
MDRTGLMQEGMRVPSGMVYPSLCGLGSEKVREPSGTIPGLGYVSDRNPDLQYKPTAAETM
DNSHMSMKQSNGFNPLFKTPPGLQKAPVPTSESLVMDRSASDKQNPLSVNGANYLRIPWM
NPYMESTSPAMYPFIDSPNKYSLNMYKAFLPQQSAYSIPQHLAYSPVCPNGERFVYIPPS
HYVGPHIASGLAPSIKIPPPSATPAIPTSVHCLEKNLPWKMGVSPGSAVDSHAYSHLPNS
KQPRVTCVKSTTGNISPEPALLLNPSQRPSSRLHCPVQQVGDSFSEFQTPFAKIPTPPTS
IVHSKPLCNVSNDFTPLRIPNIKVHKNHEPEIAQVQAPLKKNRDRKESKSPVLVQKQMPH
KDGGEKPLDLSSKFGDADISKVECTENAPSILHLASHVNTMGLSSRDAHKEAISPPTNSS
GIVRPEIISTAASSWVVPGITHTEETNGIIMSLKNKTLERVMPQQRSSSCPRMGSSESVV
CSNPGIVPAMGRPASASPAPNANAEVRNPEDCNKSVIQQVPTSVSTSVKNSRAVKSSVPE
STMKVNENSMPPAAPMFVHQSEPFCSPPLAYPSSFIPYQVSETLALSHLHLHNKAPVYPH
PVLLSNGSLFPGPMAPKPGIPYSMPTNRDYMTYQDTLGMVHPILLPPTTIEMSKDGQERR
SRSHERPRYDDSPPRSRLLDISDSSSKLSFEIPADKALKVHHGSRHVSKPEKLSTNAERD
AKCNTNLAVKLKTNDVTVEKPEQGLQNRDLITREEIQRTNEFHRSFQVSRPTLESPVFHY
RQESPLGNQNADCSAAEACARFLAPPESNDVPVGHFSRGQEKSQPFLGSNGHSDIEMIDS
LGRDAADEFETINGKLVKTKSSKLTKRIANSAGYVGDRFKCVTTELYADSSQLSREQRAL
QIEGLEEDSILSPPAAYCERAMMRFSELEMKAQEEHMPSKDSESCKNVTEWEELKPAVAK
PVVEHSGNIQMEGLEKSTLVNMDEIAKYPEREYLKRDCHFERMNLYEEAVLPTDNFSQRH
CLSIKRKHPEDIQPEEFLHSLTTEEALREETQAKRKKIDDYCGNDLVDCSSKALAESHSN
EVTNLKVCIELTGLHPKKQRHLQHLRELGQQCRRDSSEIRVVSETENKLRPWEEEQSIKK
KPESKCTSGLESIKTDIPEEDTSVPLHPKGFTSGCPSSKQQNQTHSTLVPRLGSKQQKIR
DGRKSNVQNADEEGGLQDTSLLEDYTDCEKPSGKRQCKTKHLAPQERRRKKLSVSGDDST
DEKVVLRGHKKHAEGSSDDSPVKTQEQMAPAIQTPSLSLPLPNTVQEATPSRPMPPEARR
LIVNKNAGETLLQRAARLGYEEVVLYCLESKSCDVNHRDNAGYCALHEACARGWLSIVRH
LLEHGADVNCSAQDGTRPIHDAVENDHLEIVRLLLSYGADPTLATYSGRTIAKMTHSEAM
ETFLTEYLTDLQGRSCDDPGLSWDFYGSSVCDLKEESGFDILANPPGPDEEDDGYMDAFE
FEFSDSPLLPCYNIQVSLSQGPRNWMLLSEVTKRLKMSSQTFTAENPHLEIVTITEAEFY
KQVSLSQLFSSPEGLEGFSPDSREMVELVEFTNELQTLLGSSIEWIDPENETTYSSC
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcactggacttatgcaggaagggatgagagttccgagtggtatggtgtatcct
agtttgtgtggtcttggctcagagaaggtccgtgaaccttccggcaccattcctggactt
ggatatgtgtctgacagaaatcccgatctgcagtacaaacctactgctgctgaaactatg
gataattctcacatgtctatgaaacagtcaaatggatttaatcctttgttcaaaacacca
cctggactacaaaaggcacctgttcctaccagcgaatcacttgtaatggacagatcagca
agtgacaagcaaaatcctttaagtgttaatggtgctaattacttgaggattccgtggatg
aatccatacatggagagcacatcaccagctatgtatccctttattgattcaccaaataag
tattcattaaatatgtataaagcatttctacctcagcagtctgcttacagcataccacag
catttggcctactcaccagtctgtcccaatggtgaacgatttgtctacataccaccttca
cactatgtagggcctcatattgcatcaggtctagcaccatccataaaaatacctccacca
tcagctacacctgcaattcctacttcagtacactgtttagaaaagaatttaccttggaaa
atgggagtaagccctggatctgcagttgactcgcatgcatattcgcatctcccaaacagc
aaacaaccaagggtcacatgtgttaaatctacaactgggaatatctcaccagagcctgct
ctgcttctaaatccttctcagaggccatcttctagacttcactgcccagtccagcaagtt
ggagatagcttttcagagtttcagactccatttgccaaaattccaacaccgcctacttcc
attgtccactcaaagccactctgtaatgttagcaatgatttcacccctttaaggatccct
aacataaaagttcataaaaatcatgagcctgaaatcgcacaggtgcaagcaccactgaaa
aagaatagggatagaaaagaaagcaaatctccagtcttggtgcagaaacaaatgcctcat
aaagatggaggagaaaaaccactagatttgtcttccaagtttggtgatgctgatatttca
aaagtggaatgtacagagaatgcaccatctattttacatcttgctagccatgtgaatact
atgggtctgtccagcagggatgctcataaagaagccatttcccctcctacaaatagcagt
ggtatagttagacctgaaattatcagtaccgctgcatcttcatgggtggttcctggtatt
actcatactgaagagactaatggcatcattatgtcacttaaaaacaaaactctggagaga
gtgatgcctcagcaaagaagctcttcatgtcctcgaatgggaagctctgaaagtgtagta
tgtagtaatccaggaattgtccctgcaatgggtcggccagcttctgcttcccctgcccca
aacgctaatgcagaagtcagaaatccagaagactgtaataaatctgttattcagcaggtg
cctacatctgttagcacctctgttaaaaatagtagggcagtgaaatcatctgttccagag
tccaccatgaaagtaaatgagaatagtatgccccctgctgcacctatgtttgtccatcag
agtgagcctttttgttctcctcccttggcatacccaagcagttttatcccctatcaagtt
tcggagacccttgccttgtcacatctacacttgcataacaaagctcctgtatatccccac
cctgttttgctttccaatggtagtctttttcctgggcctatggcaccaaaaccaggaatc
ccttacagtatgcctactaacagagattacatgacttatcaagacaccttaggcatggtc
catccgattttattaccaccaacgactatagaaatgagcaaggacggacaagaaagaaga
tctagatctcatgagagacctaggtatgacgattctccacccaggagtaggctgttagat
atttctgactcaagctcaaaattaagttttgaaatacctgctgacaaagccctgaaggtc
catcatggttccagacatgtttcaaaaccagagaagttgagcacaaatgcagaaagagat
gcaaaatgcaacactaacttggcagtgaaattaaaaacaaatgatgtgactgtggagaaa
ccagaacagggattgcagaacagagatcttataactagagaagagattcagagaacaaat
gaatttcacagatcttttcaagtttccagacctacactagagtcacctgtttttcactac
aggcaggagagccctttaggcaaccaaaacgcagactgcagtgcagctgaggcttgtgct
aggtttttggcaccacccgagagcaatgacgttcctgttggacattttagcagaggacag
gagaaatcgcagccttttcttgggtcaaatggacattctgatattgaaatgattgattcc
cttggcagagatgctgctgatgaatttgaaacaattaatggaaaacttgtcaaaacaaaa
tcctcaaaactgacaaaaaggatagcaaactctgcaggttatgtgggggatcggtttaaa
tgtgtgacaacagagttgtatgcggactcaagtcaactcagccgagagcagagggctttg
caaattgaaggcttagaagaggacagtattttaagtccacctgctgcttactgtgagcgt
gcaatgatgcgtttctcagagctggagatgaaagcgcaggaagagcacatgccatccaaa
gactccgagtcctgcaaaaatgttacagagtgggaggagctgaaacctgctgtagcaaaa
cctgtggtggaacattctggcaatatccaaatggaagggcttgaaaagagcactcttgtg
aatatggatgaaattgcaaagtatcccgagagagagtacctgaaaagggactgccacttt
gagagaatgaatctgtatgaagaagcagtgctcccaacagataacttcagtcaaaggcat
tgtctgagtataaagagaaagcacccagaggacattcagccagaggaattcctgcacagc
ttaaccacagaggaggcattgcgagaggagacacaggctaaaagaaaaaagattgatgac
tactgtggaaatgatctggtagactgttcatcaaaggctcttgcagagtcccattctaat
gaagttaccaatctcaaagtctgtatagagttaactggactccaccctaaaaagcaacga
cacctgcagcatctcagggaactcggccagcaatgcagaagggactcaagtgaaatcaga
gtggtttcagagactgaaaataaactgagaccatgggaggaagagcagtcaatcaagaag
aaacccgaaagtaaatgcacaagtggcctggagagcataaaaactgacatccctgaagaa
gacacctctgttcctctgcaccctaaaggatttacatctggctgcccaagcagcaagcaa
cagaatcagacacattccaccctagtccctcggttgggatccaaacagcagaagatcaga
gatggtcgcaagtcaaacgtgcagaatgccgatgaagaggggggtctccaagacacgtca
ttgcttgaagattacacagactgtgagaagccctctggaaaacgccagtgcaagacaaag
cacctggcaccacaagagaggaggaggaaaaagttgtcagtcagtggggatgacagcaca
gatgagaaggttgtcttaaggggacacaaaaaacatgcagaaggcagttccgatgattcc
ccagtcaaaacccaagagcaaatggctcctgcaatacagacaccatcattatctttacct
ctacccaatactgttcaggaggctacaccaagtcgacccatgccaccagaagcacgccgc
ttgattgtcaacaaaaatgctggggaaactcttttgcagagagcagcacgtcttggatat
gaggaagttgtcttgtattgcttggaaagcaagtcatgtgatgtaaaccacagagacaat
gcaggctactgtgcactacatgaggcctgtgctcggggctggctgagcattgtaaggcac
cttctggagcatggggcagatgtcaactgcagtgctcaagatggaaccagaccaatccat
gatgcagtggagaatgaccacctagaaattgtacgattgttgttgtcttatggagctgac
cccacactggcaacctactcaggcaggacaattgcaaaaatgacacacagtgaagcaatg
gaaactttcttaacagagtatttaactgacctgcaagggcgcagctgtgatgaccctgga
ttgtcatgggatttttatggaagctcggtttgcgaccttaaagaagagagtggatttgac
attttggccaatcctcctgggccagatgaggaagatgatggttatatggatgcctttgaa
tttgagttctcagacagccctcttttgccttgctataacattcaggtgtctctttcacag
gggcccagaaactggatgctgctttcagaggtgacaaagagactgaagatgtcgtcacag
acatttactgctgagaatcctcaccttgagatagtcactattactgaggcggaattctac
aaacaagtgtcattaagtcaactcttctcttctccagaaggccttgaaggattcagtcca
gacagcagggaaatggtggagcttgtagaattcacaaacgaactgcagactttattgggg
tcttcaattgaatggatagaccctgaaaatgaaactacttacagcagctgttaa
DBGET
integrated database retrieval system
