Xenopus tropicalis (tropical clawed frog): 100145190
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Entry
100145190 CDS
T01011
Symbol
sema6d
Name
(RefSeq) semaphorin-6D precursor
KO
K06842
semaphorin 6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
TMEM126_like
Motif
Other DBs
NCBI-GeneID:
100145190
NCBI-ProteinID:
NP_001120152
Xenbase:
XB-GENE-967070
UniProt:
F7A6P1
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Position
3:103226594..103465569
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AA seq
1084 aa
AA seq
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MTLRAGCAWALLLTVSTVCAVSFPEDDEPINVVDYHYSRQYPVFRGRPSGNDSQHSLDFQ
LMLKIRDTLYVAGRDQVYAINLNEVPKTEVTPSRRLTWRSGQADRKNCAMKGKHKDECHN
YIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTFDYDGEEISGLARCPFDARQTNVALFAD
GKLYSATMADFQASDAVIYRSMGDGFALRTIKYDSKWLKEPHFLHAIEYGNYIYFFFREI
AVEHNNLGKAVHSRVARICKNDLGGSQRVLEKHWTSFVKARLNCSVPGDSFFYFDVLQSI
TDIIEINGIPTVVGVFTTQLNSIPGSAVCAFTMDDIEKVFRGRFKEQKTPDSVWTAVPED
RVPKPRPGCCARHGYGEGYRSSTEFPDETLSFIKSHPLMDSAIPSIIEEPWFTKTRVRYR
LTAVAVDHLAGPYLNYTVMFVGSEAGVVLKILAKTNPFSLNDSVLLEEIDAYNRAKCSGN
SEEDRKVISLQMDRDHHALFVAFSGCIVRLPLSRCERYGSCKKSCIGARDPYCGWLNHES
CGRVKPGMFFGYEQDVEYGNTVQLGDCHDILPTATTPDYKIFGDPTSDIEVPSTSVTTTS
SPVILPKVIGSWKPRMTGSRKFIYQDDPNTSEYIDPLTGVQKGVRWEVQSGDANQMVHMN
VLITCVLAAFVLGAFIAGVIVYCYREMFVRKTRKIHKDAESAQSCTDSSGSFAKLNGLFD
SPVKEYHQSIDSPKHYTNILTSRKELPPNGETKSMMMDSQGQPPELAALPTPESTPVLHQ
KSLQPIKNQWEKTHNNLNISRKETPLKSPQFFPSSPPPHSPLAHGQIPSAVVIPNATHDY
NTSFSNSNAHKSDKKLHNLEHSLGKQSSKRDHRRSVDSRNTLNDFLKHLNESAGNPKALM
GDIQVTHPNGHQVPHQTLMLDTMGNMSEVPPKVPNREASLYSPSSTLPRNSPTKRVDVPS
TPNGQMTPIESQRSYHKNSSQRHSISAMPKNMNSPNGVLLSRQPSINRGGYMPPSPSTRM
DYMQGTPIIVHQQTSLSRQSSYTGHGTLPRMGVKRTPSIKPDVPPKPSFTSQNTSVRQLN
KYSY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgacactgcgcgcgggttgtgcctgggctctgctgctaacagtaagcacggtctgtgcc
gttagctttcctgaagacgacgagcctattaatgttgtagattatcactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgattcacagcacagcctggactttcaa
ctgatgctgaaaattcgagacacactttatgtcgctggaagagatcaggtttatgctatc
aatttaaatgaagtaccgaagactgaagtaacaccaagcagaaggttgacatggaggtcg
ggccaagcagaccgaaaaaactgtgcaatgaaaggaaagcacaaggatgaatgccataac
tacatcaaggttttcgttccaagaaatgatgagatggtgtttgtctgtggtacaaatgca
ttcaatcctatgtgcagatattacaggttaaatacttttgattatgatggggaagaaatt
agtggcttggcaagatgcccatttgatgccagacaaaccaatgtagccctatttgcagat
ggcaagttatattctgctaccatggcagatttccaagctagtgacgctgtgatctatcga
agcatgggggatggatttgctctgaggacaattaaatacgactccaaatggctgaaagag
ccacattttctccatgcaatagaatacggaaattatatctatttcttctttcgtgaaatt
gctgttgaacataataatctaggcaaggccgtacactctcgtgtggcacgcatatgcaaa
aatgacttgggaggctcacagcgagtgctggagaaacactggacttcattcgtaaaagcg
cgactcaattgctctgttcctggggattctttcttctactttgatgttctgcagtctatc
acggacataatagaaatcaatggaattcccactgttgtcggtgtatttaccacacagctg
aacagcatcccaggttcagcagtttgtgctttcaccatggatgacatagaaaaggtattc
agaggaagatttaaagaacaaaagaccccagactctgtttggacagctgtacctgaagac
agagtacctaagccaagacctggttgctgtgcaagacatggttacggagaaggctacagg
tcctctacagaattccctgacgaaaccttatcttttatcaagtcccatccactgatggat
tctgccatcccatctataattgaagaaccttggttcactaaaacacgcgtaaggtacaga
ttaactgccgtagcagtggaccacttggcaggaccttacttaaactacacagttatgttt
gtgggttctgaagctggcgttgtattaaagatcctagccaagacaaaccccttttctcta
aatgacagtgtattactggaagaaattgatgcctacaaccgtgcaaagtgttctggaaat
agcgaggaggacagaaaagttatttcccttcagatggacagagatcatcatgccttgttt
gtggctttctctggctgcattgtcagactgcctttgagccgctgtgagcgatacggatca
tgcaaaaagtcttgtattggtgcaagggatccttattgtggctggctgaaccatgagtcc
tgcggaagagtgaaaccgggcatgttttttgggtatgaacaggatgtggaatacggcaac
acagtacagcttggcgactgtcatgacattttgcctactgcaactacaccagattacaaa
atatttggcgatccaacatctgacattgaagttccttctacttctgtaaccaccacaagt
agcccagttattttacctaaagtgattggttcctggaaacccagaatgactggctcacgg
aaatttatataccaagatgacccaaacacctcagagtatattgatccgttaacaggtgtc
caaaagggtgtacggtgggaagtacagtcaggagacgccaaccaaatggtccatatgaat
gttttgatcacctgcgttcttgctgcttttgtgctcggagctttcatcgcaggagtgata
gtttactgctacagggagatgtttgtaaggaaaacaagaaaaatccacaaagatgcagag
tctgctcagtcctgtacagattcaagtggaagttttgcaaaattaaatggattgtttgat
agtccagttaaagaatatcatcaaagcattgattctcccaagcactacacaaatatatta
actagtagaaaggaactgccaccaaatggagaaaccaagtctatgatgatggacagtcaa
ggacagccacctgaactagcggcccttccaacacccgaatctaccccagttcttcaccaa
aagagtttgcagcccataaaaaaccagtgggagaaaacacacaataacttaaacatctca
cggaaagaaacacctcttaaaagtcctcagttctttccttccagccctccaccccattca
cctttagctcatgggcaaataccaagtgctgttgttattccaaatgccacccatgactac
aatacttccttttcaaactcaaatgcccacaaatcggataaaaaattgcataacctggag
cactctttgggaaaacagtcaagcaaaagagaccacaggcgctctgttgattcaaggaat
acattaaatgactttttgaagcatttgaatgaatctgctggaaaccccaaagctcttatg
ggagatattcaagtaacacatccgaatggtcaccaagttccacatcaaactttaatgtta
gatacaatgggcaacatgtctgaagttccacctaaagttccaaacagagaggcatctctg
tattccccatcgtctactctaccaagaaacagcccaacaaaaagagtagatgtaccgtca
actccaaatgggcaaatgactcctatagaatctcaaaggagctatcataagaactcttca
cagaggcattcaatatcagccatgcctaaaaatatgaactcaccaaatggtgttttgctt
tcaagacagccaagtattaatcgaggagggtatatgcctccaagtcccagcacaaggatg
gactatatgcaagggacgcctataatagtgcaccaacagacttctttgtcacggcaaagt
agttatacagggcatggaacccttcctcgcatgggggtaaaaaggacaccatctattaag
ccagatgtgccaccaaaaccttcatttacttcacaaaatacatctgtaagacagctgaac
aaatatagctactaa
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