Xenopus tropicalis (tropical clawed frog): 100145199
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Entry
100145199 CDS
T01011
Symbol
erc1
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100145199 (erc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100145199 (erc1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Others
Others
100145199 (erc1)
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
100145199 (erc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
CCDC39
AAA_13
Astrin_C
CCDC192
CCDC18_1st
Tropomyosin
ATG16
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
100145199
NCBI-ProteinID:
NP_001120160
Xenbase:
XB-GENE-956039
UniProt:
A0A8J0QBL0
B0JZF9
LinkDB
All DBs
Position
3:complement(9471659..9641357)
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AA seq
1125 aa
AA seq
DB search
MYGSSRSVGKVESSSQSPGRSPRLPRSPRLGHRRTNSTGGSSGGPPGGGSGKTLSMENIQ
SLNAAYATASPMYLSDHEIVGGDTPKSTMTLGRSGGRLPYGVRMTAMGSSPNIATSGVAS
DTIAFGDHHLPPVSMASTVPHSLRQARDNTIMDLQAQLKEVLRENDLLRKDVEVKESKLS
SSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVVQEENQHLQMSIQAMQDELRIQR
DLNQLFQQDSVGRLKEPLTGELTEDNFRLLHVEHDRQAKELFLLRKTLEEMELRIDTQKQ
TLSARDESIKKLLEMLQSKGIPNKVMEEDHERTRRLAEAEMHVHHLDSLLEQKEKENNIL
REELHRRFENAPDSAKTKALQTVIEMKDSKITSMERGLRDLEDEIQMLKSNGAMSTEERE
EEMKQMEVYRSHSKFMKNKVEQLKEELSAKENQAEELRKRVSALQTEQSSIGQVKQELSR
KDTELLALQTKLETLNNQFSDSKQHVEVLKESLTAKEQRAAILQTEVDALRLRLEEKETM
LNKKTKQIQEMSEEKGTLSGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQLSSL
KDRVKSLQADTTNTDTALTTLEEALAEKERIIERLKDQRDRDEREKQEELESYKKELKDL
KEKVSVLQGDLSEKESSLLDLKEHASTLASSSLKKDSRLKTLEIALEQRKEEFLKLESQL
RKALELAQEAKSNPETNERFQQMERDVTRYREEVGKSQAEVDRLLDILKEMENEKNEKDT
KIAELESLTSRQIKDQNKKVATLKHKEQVEKKKNAQLLDEARRREDNLTDSSQQLQDVMR
QKDDRIEELEEALRESVQITAEREMVLAQEESARNNYQKQVEELMSAMEKVKQELESMKA
KLSSTQQSLAEKEIHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKK
KTQDEVASLKREKDRLVQQLKQQTQNRMKLMADNYEGDHMKCSAHSNQTNHKPSPDQMIQ
PLIDLDQNRSKLKLYIGHLTALCQDRDPHILQELHPPAAYYLDDNQAAWEQRLQKMTTDE
LTEELEKCEHESAELQEFANAILQQIADHCPDILEQVVNALEESS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaagttctcgctccgtcgggaaggtggagtccagcagccagagtcctggccgc
tctccgaggcttccacgttctcctcggttaggccaccgccgcacaaacagcaccggaggg
agttctggagggcctcctggtggtggtagtggaaagaccctgtccatggaaaatatccag
tctcttaatgctgcttatgccacggcgagcccgatgtatctcagcgaccatgaaattgtt
gggggcgacacacccaaaagcaccatgactttggggaggtccgggggtagacttccctac
ggcgtaagaatgactgcaatgggaagcagtcccaacatcgccactagtggcgtggccagc
gacacaattgccttcggggaccatcatttaccaccggtcagcatggcctccaccgtcccc
cattcattacgccaggcacgagacaacaccatcatggaccttcaggctcaactcaaggaa
gttctgagggaaaatgaccttctgcgcaaagacgtcgaggtgaaagagagcaagctgagc
tcgtccatgaacagcatcaagaccttctggagccccgagctgaagaaggagcgagccttg
cgtaaagacgaggtgtccaagatcactgtgtggaaggagcaataccgggttgtccaagaa
gagaatcagcacctacaaatgagcattcaggccatgcaagacgagctgaggatccagcgg
gacctgaatcagctgttccagcaggacagcgtcggccgtctcaaggaaccacttaccgga
gagctgacagaggacaacttccgccttctgcacgtggagcatgaccgccaagccaaggag
cttttcttgctgcgcaaaacactagaagagatggagctgcgcattgacacgcaaaaacag
acactcagcgccagggatgagtccatcaaaaagctgctggagatgctgcagagcaaaggc
atccccaataaggtcatggaggaagaccacgaaaggacacgaaggttggccgaagccgag
atgcacgtgcaccatcttgacagcctgctggagcagaaagagaaggagaacaacatcctc
cgagaggagttgcaccggcgcttcgagaatgccccagattcagctaagaccaaggcactt
cagacggtaatcgaaatgaaggactctaagatcacttctatggagaggggcctgcgggac
ctggaggatgaaattcaaatgttaaaatccaatggggccatgagcacggaggaacgggag
gaagaaatgaagcagatggaggtttatcgcagccattccaagttcatgaagaacaaggta
gagcaactgaaagaggagctgagcgctaaggagaatcaggcggaggaactgaggaagaga
gtgtcagctctgcagactgagcagtcaagcatcgggcaggtgaagcaggagctctcccgt
aaggacacagaactcctggccctgcagacgaagctggagaccctcaacaaccagttctct
gacagtaagcagcatgtggaggtgctaaaggaatctctaaccgccaaggagcagcgagcg
gccatactgcagactgaggtggatgctctgcgcttacgtctggaggagaaggagacgatg
ctgaacaagaagacaaagcagatccaggaaatgtcggaggagaagggaaccctttctgga
gagatccacgacctcaaggacatgctggatgtgaaagagcgcaaagtcaatgtactgcag
aaaaagatagaaaacttacaggagcagctgagagacaaggagaagcagctaagcagcttg
aaggaccgggtgaagtccctgcaggccgacaccacaaacacagacacggcccttaccaca
ctggaggaggcccttgctgaaaaagagagaatcattgagcgccttaaagatcaaagggac
cgggatgagcgtgagaagcaggaagagcttgagtcctacaagaaagagcttaaggacctc
aaggagaaagtcagcgttctgcagggagacctgtccgaaaaagagtcctcgctgctcgat
ctgaaggaacatgcatcgactctcgcctcatccagcctaaagaaagactcgcgcctcaaa
accctggagattgccctggaacagaggaaagaggagtttctgaagctggagagtcagctc
aggaaggctctcgaacttgcccaggaggcgaaatccaaccccgaaacgaacgagcgcttc
caacagatggagagggacgtgacgaggtaccgggaggaagtggggaaatctcaggccgag
gtggaccggttactggacatcctaaaagagatggagaacgagaaaaacgagaaggacacc
aagattgctgagctagagagcctcacatccagacaaatcaaagatcagaataagaaagtg
gccacactgaaacacaaggaacaggtcgagaagaagaagaatgcgcagctcttggacgaa
gccaggcgaagagaagacaacctgactgacagctcacagcagctccaggacgtgatgcgg
cagaaagatgaccgcatcgaggagctggaggaggccctgcgggaaagcgtccaaatcacg
gccgagcgagaaatggtgctggcacaggaagaatcggcaaggaacaattaccaaaaacag
gtcgaggaactgatgtctgcaatggagaaggtaaagcaggagttggagtccatgaaggca
aagctgtcatccacccagcagtccctggcagagaaagagatccatctgaccaacttgcgt
gccgagaggcgcaaacacctggaggaggtgctggaaatgaagcaggaagccctcctggca
gccatcagcgagaaggacgctaacattgccctgctggaactgtcctcatccaagaagaag
aagacccaggatgaggtggcttctttgaagagagagaaggacagactggtgcagcagctg
aaacagcagacacagaacaggatgaagctaatggctgataactacgaaggagaccatatg
aaatgctccgctcactccaaccaaaccaatcacaagccctccccagatcagatgatccaa
cccctcatagacctcgaccagaaccgcagcaaactcaaactgtacatcggccacctgact
gctctgtgccaggacagagacccccacattctccaggagctccatccgcctgcggcctat
tacctggatgacaaccaggcagcttgggagcagaggctgcagaagatgacaacagatgag
ctgaccgaagagctggaaaagtgcgaacacgagagcgccgagctgcaggagttcgccaat
gccattctccagcaaatcgctgatcactgccctgacattttggagcaagttgtcaacgcc
ttagaggagtcgtcctga
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