Xenopus tropicalis (tropical clawed frog): 100145421
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Entry
100145421 CDS
T01011
Symbol
lrrc8d
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100145421 (lrrc8d)
Ion channels [BR:
xtr04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
100145421 (lrrc8d)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_R13L1-DRL21
LRR_1
LRR_9
LRR_At5g56370
LRR_LRWD1
LRR_EndoS
LRR_Zer-1
Mannitol_dh
Motif
Other DBs
NCBI-GeneID:
100145421
NCBI-ProteinID:
NP_001120353
Xenbase:
XB-GENE-969887
UniProt:
B1H2G3
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Position
4:complement(105552305..105587099)
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AA seq
855 aa
AA seq
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MFTLSEVASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQITKDQVVCLPVLES
AVNSRNAHLLSSENSPQVSSKFEETATEAKEKWQMTGATEPPETSPTKPSFSPTNSGKSS
GEQLNKEEQDPRGRKTNLDYQQYIFINQMCYHVALPWYSKYFPYLALIHTIILMVSSNFW
FKYPKTCSKIEHFVSILGKCFESPWTTKALSETACEDSEENKQRITGAHSFRKHLSSSSE
EGSPSPSTPMINKSGPKFSADKPVLEVPGMTILDKKDGEQAKALFEKVRKFRTHVEDSDL
IYKLYAVQTVIKTVKFIFILCYTLTFVTAISFKHVCSPNVEHLTGYMKFECTHNMAFMLK
KLLVSYIALICVYGLVCFYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMV
DQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHISRNAQDKQELHLFMLSGVP
DAVFELTDLEVLRLELIPEAKIPAKISQMTALQELHLYHCPAKVEQTAFSFLRDNLKCLH
VKFTDVAEIPAWVYLLKNLRELYLMGNLNSENNKMIGLESLRELRHLKILYVKSNLTKIP
SNITDVAPHLTKLVIHNDGTKLVVLNSLKKMMNVAELELHNCELERIPHAIFSLTNLQEL
DLKSNSIRTIEEVISFQHLKRLTCLKLWHNKIVNIPQSISQVKNLESIYLSNNKLESLPA
ALFHLQKLRFLDISYNCISMIPLEIGLLQNLQHFYVTGNKVDVLPKTLFKCLKLRTLCLG
QNCITSVPEKIGHLLQLTHLELKGNCLDRLPFQIIQCRLLKKNGLVVEDHLFDALPSEVK
EALNQDTNTPFANGI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtttactctctcagaagttgcatcactgaatgatatacaacctacgtaccgtattctg
aagccatggtgggatgtatttatggattacttggctgtagttatgctgatggttgccatt
tttgctggcaccatgcaaataaccaaagatcaggttgtttgcttaccggtactggagtca
gctgtaaattcaaggaatgctcatttgttatcaagtgagaatagccctcaggtttcttca
aaatttgaagagactgcaactgaggccaaagaaaaatggcaaatgactggagcaacagag
cctccagaaacatctccaacaaaaccaagcttttcgcccacaaactcaggtaaatcttca
ggagaacagctaaacaaagaggaacaagatccgagagggagaaaaacaaatctggattat
cagcagtatatattcataaaccaaatgtgttatcatgttgctctcccatggtactccaag
tattttccttaccttgctcttatccacactataattttaatggtaagcagtaacttctgg
tttaaatatccaaagacttgctctaaaattgaacattttgtttctatacttggcaagtgc
tttgaatctccttggacaacaaaagcactatctgagactgcgtgtgaggattccgaggag
aacaagcagagaataactggtgcacattcttttcgaaagcacctctccagcagcagtgaa
gaaggaagtcccagtccaagtactccaatgataaacaaatctgggccaaaattttcagca
gataagcctgtactggaggttcctggtatgaccattttggataaaaaagatggtgaacag
gctaaagccctttttgaaaaggttagaaaattccgcacccatgtagaagacagtgaccta
atttataaactctatgccgtccaaacagtcattaagaccgtaaagtttatttttattctt
tgctacaccctaacgtttgttactgctataagctttaaacatgtctgtagccctaatgta
gagcaccttacaggctatatgaaatttgagtgcacacacaacatggctttcatgctgaag
aagcttttagtaagctatattgcacttatttgtgtttacggccttgtctgtttttacact
ttgttttggctgtttagaagaccgttaaaagaatattcatttgaaaaagtcagggaggaa
agcagtttcagtgacattccggatgtaaagaatgattttgcattccttttacatatggtc
gatcagtatgatcagttgtactccaaaaggtttggtgtgtttttgtcagaggtcagtgaa
aataaattgagagaaattagtttaaaccatgaatggacatttgaaaaactccggcagcac
atttctcggaatgctcaggataagcaagagctacacctgtttatgctttctggagtaccc
gatgcagtctttgagctcactgaccttgaagtcctgagacttgagctgattcctgaggct
aaaattccagctaaaatatctcaaatgactgcacttcaagagctccatctgtaccattgc
ccagcaaaagttgagcagacagcatttagttttttaagagacaacttaaagtgccttcac
gtgaagttcactgatgtggctgaaattcctgcctgggtgtatttacttaaaaatctgcgg
gaattgtacttgatggggaacttaaactctgaaaacaacaagatgattgggcttgagtct
ctaagggagttgcggcatttaaaaattctgtatgttaagagtaatttgacaaaaatccca
tctaacattacagatgttgctccccatctaacaaaactggtcattcacaatgacggtacg
aaacttgttgtactaaacagccttaagaagatgatgaatgtagcagagttggaactacac
aattgtgaactggagagaataccccatgctattttcagcctcaccaacttgcaagaattg
gatctgaaatcaaacagcatacgtacgatagaggaagtaatcagcttccaacatttaaaa
cgcttgacttgtttgaaactgtggcacaataaaattgtgaatattcctcaatccatttct
caagtgaaaaatctggagtcaatttatttatctaacaacaaactcgaatcccttcccgca
gcactctttcatttacagaaactgcgatttttagatattagttacaactgcataagcatg
atcccccttgaaattggtttgctccagaaccttcagcacttctacgtcactgggaataaa
gtggatgtcttgccaaagactctgttcaaatgtctcaaattaagaactttgtgtttggga
caaaactgtataacatctgtgccggagaagattggacatctgcttcagcttacacatttg
gagttaaagggaaactgcttagaccgtttaccctttcagatcattcagtgtcgtcttctg
aaaaaaaatgggctggttgtggaagatcatctttttgatgctttaccttctgaagttaag
gaagctttaaatcaagatacaaataccccctttgctaatggaatttag
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