Xenopus tropicalis (tropical clawed frog): 100145429
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Entry
100145429 CDS
T01011
Symbol
smyd1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00310
Lysine degradation
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100145429 (smyd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100145429 (smyd1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100145429 (smyd1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
100145429 (smyd1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100145429 (smyd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
FTA2
DUF3369
Motif
Other DBs
NCBI-GeneID:
100145429
NCBI-ProteinID:
NP_001120357
Xenbase:
XB-GENE-978314
UniProt:
B1H2H4
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Position
1:complement(18420721..18443991)
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AA seq
478 aa
AA seq
DB search
MENVEIFESEGKGRGLRAIRESWAGDIIFAEPAYSAVVFDNLSHSVCHSCFKRQEKLLRC
GQCKFAHYCDRTCQKESWANHKNECVAIKKAGKAPNENIRLAARILWRIEREGSGLTEGC
LVSIDDLQNHIDKFDEAEKGLLMEDVQKFLEYWPSQSQQFGMQYISHIFSVISCNGFTLS
DQRGLQAVGVGIFPNLCLANHDCWPNCTVIFNNGKIELRALGKINKGEELTVSYVDFLNL
TEDRKAQLKKQYYFDCTCEHCTKKTKDALLLAVKDGEDKPEERVVKEVIQYSKDTMEKIE
KARSEGLYNDVVKLCRDCLKRQEPIFADTNIYMLRILSIYSEVLSYLQMFDDAAENAKKM
VDGYLKIYHQNNAQLGMAVMRAGVTHWHAGMIEVGHGMICKAFAILLITHGPLHPITKDL
EVMRAQTEMELRMFKENEFVYYKMREAALSNKPFQVMKEPNSEPATNLFHKKPQEAKS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgttgaaattttcgaatcggagggcaagggacggggcctgagggccattaga
gagtcctgggccggggacattatctttgcagaacctgcttactctgccgttgtgtttgac
aatctctcccattcagtgtgccattcatgcttcaagaggcaggagaaactactgcgctgc
ggacagtgtaaatttgctcactattgtgaccggacatgtcaaaaggaatcctgggccaac
cacaaaaacgagtgtgtggccattaagaaagccggtaaagcaccgaatgaaaatatcaga
ctggctgcaagaattctctggaggatagagagagaaggaagtggcctcactgagggatgc
ttggtctccattgatgatctacagaaccatatagacaaatttgatgaagcagagaagggc
ttactcatggaagatgttcagaaatttttggaatattggccaagtcagagccaacagttt
ggcatgcagtacatctctcatatatttagtgtgataagctgcaatggttttactctgagt
gaccaaaggggtctccaagctgtcggcgttggaatattccctaacctctgccttgctaac
catgattgttggccaaactgcaccgtcatattcaacaatggcaaaatcgagcttcgagct
ctcgggaagatcaacaaaggagaagagcttactgtgtcctacgtggatttcctcaatctc
accgaggacaggaaggcgcaattgaagaagcagtattactttgactgcacgtgcgagcat
tgcaccaaaaaaaccaaggatgctttgctcctggctgtcaaagatggagaagacaagcca
gaagagcgggttgtgaaagaggtgatacaatattcaaaagataccatggagaagatagaa
aaagctcgttcagaagggttgtacaatgatgtggtgaagctctgccgggactgcttgaag
agacaggagcccattttcgctgataccaacatctacatgttacggatcctgagcatctat
tccgaagtgctctcttatctgcaaatgtttgatgatgccgcagaaaatgccaagaaaatg
gtcgacggatacttgaaaatctaccatcaaaacaatgcccagctggggatggctgtgatg
agggcaggagtgacgcactggcacgctggcatgattgaagttggtcatgggatgatctgc
aaagcctttgcgatccttctcattacacacgggcctttacatcccatcactaaagactta
gaggtgatgcgcgcgcagacagaaatggagctccgcatgttcaaggagaatgagtttgtc
tattacaagatgagggaagcagctctgtccaataagcccttccaagtcatgaaggaaccc
aacagtgaaccagctacgaacttattccacaaaaagccacaagaagcaaagtcctaa
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