KEGG   Xenopus tropicalis (tropical clawed frog): 100145467
Entry
100145467         CDS       T01011                                 
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform 2
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440  Homologous recombination
xtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100145467 (top3b)
   03460 Fanconi anemia pathway
    100145467 (top3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xtr03032]
    100145467 (top3b)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100145467 (top3b)
Enzymes [BR:xtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     100145467 (top3b)
DNA replication proteins [BR:xtr03032]
 Eukaryotic type
  DNA Topoisomerases
   100145467 (top3b)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     100145467 (top3b)
   FA (Fanconi anemia) pathway
     100145467 (top3b)
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim
Other DBs
NCBI-GeneID: 100145467
NCBI-ProteinID: NP_001120391
Xenbase: XB-GENE-976087
UniProt: A0A8J0QA03 B1H2R2
LinkDB
Position
1:153943993..153973433
AA seq 845 aa
MKTVLMVAEKPSLAQSIAKILSRGSASSRKGLNGACSVHEYTGSFMGQTVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLSMVKFLQVEGRGCDYVVLWLDCDK
EGENICFEVLDAIHPVMNRAHGGERTVYRAKFSSITDTDILNAMNRLGEPNKNEALSVDA
RFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVSRGQEN
PLILDWDRVRVFDREIAQMFINITKTAKEAQVESVSKKEKAKQRPQALNTVEMLRVASSA
LGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLRQQANNPFWADMVKTLLAE
GINRPRKGTDAGDHPPITPMRSATEAELGGDAWRLYEYITRHFIATISHDCKYLQTSIAF
SVGPEKFTTTCKEVISPGFTEIMPWQGIPKEESFQPCERGDKFSVDEMKLMEKQTCPPDY
LTEAELISLMERHGIGTDASIPVHINNICQRNYVTVESGRRLKPTSLGIVLVHGYYKIDP
ELVLPTIRSAVEKQLNLIAQGKANFQQVLDHTLDIFKRKFHYFVDSIAGMDELMEVSFSP
LAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKLYKELRCPLDDFEL
VLWSSGSRGKSYPLCPYCYNHAPFRDMKKGMGCNECTHPTCQHSLSMLGIAQCVECESGV
MVLDSTSGPKWKMSCNKCNVIVHFFENAHRVRVSAETCDACDAAVVHVDFNKAKCPLPAD
QTQHAGCVFCDPVFQDLVELKHATMKHPMHKGGQGRRQGRGRGRGRRANPKKPKDKMAAL
AAYFV
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgaagacagtactcatggttgcagagaagccttcattggcacagtcaatcgcaaagatt
ctttctagagggagtgcctcctctcgtaaaggactgaatggtgcgtgctctgttcatgaa
tacacaggatcattcatgggacagactgtgcgcttcaagatgacatctgtctgtggtcac
gttatgagcttggactttatagggaaatacaacaactgggacaaagtggatccagcagag
ctctttagcaaagcacctacagagaagaaagaagccaacccaaaactcagtatggtcaaa
ttccttcaggtggaaggacgtggttgtgattatgttgttctttggctggattgtgataaa
gaaggagaaaatatttgctttgaggttctagatgctatacatcctgtaatgaacagagca
catggcggggagcgcacagtataccgggcaaagttcagctccattactgatacagacatc
ctaaatgcaatgaaccgacttggggagcccaataaaaatgaagcactgtcagtcgatgcc
aggtttcagacaaagtattttcaaggaaaatacggcaacctagacagctctctgatctcc
tttggaccgtgtcagacaccaacacttggattttgtgtggaaagacatgataagatccag
tctttcaaaccagagacttattgggtccttcaagtaaaggtgagccgtggacaggaaaac
ccactgatactagattgggatcgggtgcgagtctttgacagagagattgctcagatgttc
ataaatatcaccaagactgcaaaggaggcacaggtagagtctgtaagcaagaaggagaag
gccaaacaaaggccgcaagcattaaacactgtggaaatgcttcgtgttgctagttctgca
ctgggaatgggtcctcaacatacaatgcaaattgcagagcgcctgtacacccaaggttac
atcagctatccccgaacagaaaccacccactatcctgaaaactttgacctgaaaggaacg
cttcggcagcaagctaacaaccctttctgggccgacatggttaaaactttgcttgctgag
ggaatcaaccgccctagaaaaggaactgatgccggagaccatccaccaattacaccgatg
cgttccgctacagaggcagaacttggtggtgatgcttggagactgtatgagtacatcact
cggcacttcattgccaccatcagtcatgactgtaaataccttcagaccagtattgccttc
agtgtgggacctgagaagtttaccaccacttgcaaggaggtgatctcaccaggattcaca
gaaattatgccctggcaaggtattccaaaggaagagagtttccagccgtgcgaaagagga
gacaagttcagtgtggatgagatgaaactgatggaaaaacagacatgccctccagactac
ttgactgaagctgagctcatctctttaatggagaggcatggcattggaactgatgccagc
attccagtgcacattaataatatctgccagcgcaattatgtgacagtggagagtgggcgc
agactgaagcctactagcctgggcattgtgttggtgcatggatattataagatagatccg
gaactggtgcttccaaccattcgcagtgcagtggagaagcagctcaacttgatcgctcag
gggaaggcaaatttccagcaagtcctggatcacaccttggatatctttaagaggaaattc
cactactttgtggattcaatagcagggatggatgagttgatggaagtatcattctcacct
ctggctgcaactggcaaaccactgtctcgctgtggaaaatgtcatcgatttatgaaatat
attcaggccaagcctagccgcctccactgctctcactgtgatgaaacctatagtcttcct
caaaatggcacaatcaaactgtacaaagaactgcgctgcccactagatgattttgaactg
gttctgtggtcatcagggtcccgagggaaaagctaccctctgtgtccatactgctacaat
catgccccttttagggacatgaaaaaagggatgggctgcaatgagtgcacacatccaacc
tgccagcactcacttagcatgctgggaattgctcagtgtgttgagtgtgaaagtggggta
atggtccttgactccacctctggtccaaaatggaagatgtcctgcaataaatgcaatgtc
attgtgcacttctttgagaatgcacatcgtgtgcgtgtatctgcagagacttgtgatgca
tgcgatgctgcagtggtccatgtcgacttcaacaaggcaaagtgtcctctacctgcagat
caaacacagcacgctggctgtgtgttctgtgaccctgtatttcaggacctagttgagcta
aaacatgccacaatgaaacatcccatgcacaagggtgggcagggaagaaggcaaggtaga
ggaagaggcaggggaagaagggcaaaccccaaaaaacccaaggacaaaatggcagcccta
gctgcctactttgtgtaa

DBGET integrated database retrieval system