Xenopus tropicalis (tropical clawed frog): 100145467
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Entry
100145467 CDS
T01011
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform 2
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03440
Homologous recombination
xtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100145467 (top3b)
03460 Fanconi anemia pathway
100145467 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtr03032
]
100145467 (top3b)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100145467 (top3b)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100145467 (top3b)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Topoisomerases
100145467 (top3b)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100145467 (top3b)
FA (Fanconi anemia) pathway
100145467 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
100145467
NCBI-ProteinID:
NP_001120391
Xenbase:
XB-GENE-976087
UniProt:
A0A8J0QA03
B1H2R2
LinkDB
All DBs
Position
1:153943993..153973433
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AA seq
845 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGSASSRKGLNGACSVHEYTGSFMGQTVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLSMVKFLQVEGRGCDYVVLWLDCDK
EGENICFEVLDAIHPVMNRAHGGERTVYRAKFSSITDTDILNAMNRLGEPNKNEALSVDA
RFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQVKVSRGQEN
PLILDWDRVRVFDREIAQMFINITKTAKEAQVESVSKKEKAKQRPQALNTVEMLRVASSA
LGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGTLRQQANNPFWADMVKTLLAE
GINRPRKGTDAGDHPPITPMRSATEAELGGDAWRLYEYITRHFIATISHDCKYLQTSIAF
SVGPEKFTTTCKEVISPGFTEIMPWQGIPKEESFQPCERGDKFSVDEMKLMEKQTCPPDY
LTEAELISLMERHGIGTDASIPVHINNICQRNYVTVESGRRLKPTSLGIVLVHGYYKIDP
ELVLPTIRSAVEKQLNLIAQGKANFQQVLDHTLDIFKRKFHYFVDSIAGMDELMEVSFSP
LAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGTIKLYKELRCPLDDFEL
VLWSSGSRGKSYPLCPYCYNHAPFRDMKKGMGCNECTHPTCQHSLSMLGIAQCVECESGV
MVLDSTSGPKWKMSCNKCNVIVHFFENAHRVRVSAETCDACDAAVVHVDFNKAKCPLPAD
QTQHAGCVFCDPVFQDLVELKHATMKHPMHKGGQGRRQGRGRGRGRRANPKKPKDKMAAL
AAYFV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagtactcatggttgcagagaagccttcattggcacagtcaatcgcaaagatt
ctttctagagggagtgcctcctctcgtaaaggactgaatggtgcgtgctctgttcatgaa
tacacaggatcattcatgggacagactgtgcgcttcaagatgacatctgtctgtggtcac
gttatgagcttggactttatagggaaatacaacaactgggacaaagtggatccagcagag
ctctttagcaaagcacctacagagaagaaagaagccaacccaaaactcagtatggtcaaa
ttccttcaggtggaaggacgtggttgtgattatgttgttctttggctggattgtgataaa
gaaggagaaaatatttgctttgaggttctagatgctatacatcctgtaatgaacagagca
catggcggggagcgcacagtataccgggcaaagttcagctccattactgatacagacatc
ctaaatgcaatgaaccgacttggggagcccaataaaaatgaagcactgtcagtcgatgcc
aggtttcagacaaagtattttcaaggaaaatacggcaacctagacagctctctgatctcc
tttggaccgtgtcagacaccaacacttggattttgtgtggaaagacatgataagatccag
tctttcaaaccagagacttattgggtccttcaagtaaaggtgagccgtggacaggaaaac
ccactgatactagattgggatcgggtgcgagtctttgacagagagattgctcagatgttc
ataaatatcaccaagactgcaaaggaggcacaggtagagtctgtaagcaagaaggagaag
gccaaacaaaggccgcaagcattaaacactgtggaaatgcttcgtgttgctagttctgca
ctgggaatgggtcctcaacatacaatgcaaattgcagagcgcctgtacacccaaggttac
atcagctatccccgaacagaaaccacccactatcctgaaaactttgacctgaaaggaacg
cttcggcagcaagctaacaaccctttctgggccgacatggttaaaactttgcttgctgag
ggaatcaaccgccctagaaaaggaactgatgccggagaccatccaccaattacaccgatg
cgttccgctacagaggcagaacttggtggtgatgcttggagactgtatgagtacatcact
cggcacttcattgccaccatcagtcatgactgtaaataccttcagaccagtattgccttc
agtgtgggacctgagaagtttaccaccacttgcaaggaggtgatctcaccaggattcaca
gaaattatgccctggcaaggtattccaaaggaagagagtttccagccgtgcgaaagagga
gacaagttcagtgtggatgagatgaaactgatggaaaaacagacatgccctccagactac
ttgactgaagctgagctcatctctttaatggagaggcatggcattggaactgatgccagc
attccagtgcacattaataatatctgccagcgcaattatgtgacagtggagagtgggcgc
agactgaagcctactagcctgggcattgtgttggtgcatggatattataagatagatccg
gaactggtgcttccaaccattcgcagtgcagtggagaagcagctcaacttgatcgctcag
gggaaggcaaatttccagcaagtcctggatcacaccttggatatctttaagaggaaattc
cactactttgtggattcaatagcagggatggatgagttgatggaagtatcattctcacct
ctggctgcaactggcaaaccactgtctcgctgtggaaaatgtcatcgatttatgaaatat
attcaggccaagcctagccgcctccactgctctcactgtgatgaaacctatagtcttcct
caaaatggcacaatcaaactgtacaaagaactgcgctgcccactagatgattttgaactg
gttctgtggtcatcagggtcccgagggaaaagctaccctctgtgtccatactgctacaat
catgccccttttagggacatgaaaaaagggatgggctgcaatgagtgcacacatccaacc
tgccagcactcacttagcatgctgggaattgctcagtgtgttgagtgtgaaagtggggta
atggtccttgactccacctctggtccaaaatggaagatgtcctgcaataaatgcaatgtc
attgtgcacttctttgagaatgcacatcgtgtgcgtgtatctgcagagacttgtgatgca
tgcgatgctgcagtggtccatgtcgacttcaacaaggcaaagtgtcctctacctgcagat
caaacacagcacgctggctgtgtgttctgtgaccctgtatttcaggacctagttgagcta
aaacatgccacaatgaaacatcccatgcacaagggtgggcagggaagaaggcaaggtaga
ggaagaggcaggggaagaagggcaaaccccaaaaaacccaaggacaaaatggcagcccta
gctgcctactttgtgtaa
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