Xenopus tropicalis (tropical clawed frog): 100145510
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Entry
100145510 CDS
T01011
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100145510 (caprin2)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100145510 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
DUF3209
Motif
Other DBs
NCBI-GeneID:
100145510
NCBI-ProteinID:
XP_002942296
Xenbase:
XB-GENE-1014055
UniProt:
F6QR57
LinkDB
All DBs
Position
3:11014290..11036618
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AA seq
1012 aa
AA seq
DB search
MVQLSPSSPKDGERQMENISEDYRHRCQQALSPLQSSLLSTTPFQAYETYIDNGLICLKH
KIRNIEKKKVKLDDYRDRLSSGEALNQDQQEAVEKYEEVVHNLDFARELQKTFSALSQDL
LKAQKKALRREHLLKVEAEKKRLKAILQVQYMLHALCQDHVQKDFKEGSNGAVSLSPKDT
DHLVKFAKLTCQKRYPHMSLEDQMDQASICLWNLFESSEKTVAGTSYKYLKELVTKLLDC
GYFENVPEAPVEKAKEKHIPEVLPTKVEAGNSVTKEPEPLKEYAKCASHPKELPVRHFVA
IAPKPEAVKQNTEEYKAINAKYCRPEALKPWGMSLEIRHPEPRRPNPTPVLTPLIKPWEV
MPPRLKKCDPDPKERRERVPKFPSEVKPVVPKFPSEVKPVASIKLLSKGLKDLKLPNAVN
GQLPVKRQEAPPTIVANGQPPPPVSSTQPHKVPLLALDEFCSSPTLPKDPELRKQRLEDL
IDQIKGTYNFMQDSMLDFDLSSPRLISSKLPCETTSVVSSETKQDETDPVLQLEEVSPVS
LDTKEDGVACEMLSESAISEPLAPTPLKENLPVNTSDEEQSCPIEQMAEARQDLPETLPE
RNNTPLPMGSDQLPSPKTPTHTSVLQLQQQCPPLSPRSTPVSMSSPFQGMQTVFKVNAPL
PLHKEQELKVEAPYSTGYHQTFTTASTQTLPHCMLDTSFGDQNSLIQEPLPGSPYPSTGI
QVNGSLPCYTSSPNLLPRMTPPFVSSRGTIRGTSRGRVMTNGYRCPTGYKGPESYRGAQC
INNGSFAHGQCPGREYPATQFIPRDGSSTLFHKRGTNTITRMNSRGFSESPQMNSPDKED
SFNSTDSGHGETRSLSSLDMSMTNQAATILPVHVYPLPQQMRVAFSAARTSNFAPGTLDQ
PIVFDLLLNNLGDTFDFQGGRFMCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAY
ANDGAPDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctctcgccctccagccccaaagatggggagaggcaaatggagaacatctca
gaggattacagacatcgctgccagcaagcccttagccccctgcagtcctccctcctatcc
accacccctttccaagcctacgaaacctacatcgacaatggtttaatctgtttaaagcac
aagatccggaacattgagaaaaaaaaggttaaacttgatgattacagagatcgcttaagc
agtggagaggccctcaatcaagaccagcaggaagcagttgaaaagtatgaagaggtcgtt
cataacttggattttgccagagagcttcaaaaaaccttttctgcactgagccaagatctc
ttaaaagcccagaagaaagccctgaggcgggaacacttgctaaaggtcgaagcggagaag
aagcgattgaaggcaatccttcaggttcagtacatgcttcacgccttgtgccaagatcac
gtccagaaagacttcaaggaaggatcgaatggagccgtgtctctctctcccaaagatacg
gaccaccttgtgaagtttgccaagttaacctgccaaaagcggtacccccacatgagtctt
gaagaccagatggaccaggcttcaatctgcctctggaacctctttgaaagcagtgaaaaa
acagtggccggtaccagctataaatatttaaaagaattggtgaccaagcttctggactgc
ggctattttgagaatgttccagaggcccctgtagagaaggctaaagaaaaacatattcca
gaagtgcttccaacaaaggttgaagctgggaacagtgtgacaaaagaaccagagccactt
aaggaatatgcaaaatgtgccagtcaccccaaagagctccctgttagacactttgtagct
atagccccaaaaccagaggcagtgaagcaaaacacggaggaatataaagcaatcaacgct
aaatattgccgtccagaagctttgaagccctggggaatgtctcttgagatcagacatcca
gaaccaagaagacccaaccctactccagtgctaacccctctgatcaagccctgggaagtt
atgccacccaggctgaagaaatgtgaccctgatccaaaagagaggcgagagcgtgtacca
aagtttccttctgaggtgaaaccagttgtaccaaagtttccttctgaggtgaaaccagtt
gcttccataaagctgctcagtaaaggtcttaaggatttgaaactccccaatgctgtaaat
gggcaacttccagtaaagagacaggaagctcctcccaccattgtggctaatgggcagccg
cctccaccagtgagcagtactcagccccacaaggtaccactgctggctttggacgagttc
tgctcctctccaaccctcccaaaagatcccgagttgaggaagcaaagactggaagacctt
atagaccagataaaaggaacatacaacttcatgcaggattccatgttggattttgacttg
tcgtctccaaggctcatctcttctaagctcccctgtgaaactacttctgtagtttcttct
gaaacaaaacaagatgaaactgacccagttctacagctggaggaggtttcccctgtatcc
ctggacacaaaggaggatggagttgcctgtgagatgctatcagaatcggccatttctgaa
ccattggccccgactccactaaaggaaaatctaccggttaatacatctgatgaggagcag
agttgccccattgagcagatggctgaggccagacaagaccttcctgagaccctacctgaa
aggaacaatactccactccctatgggtagcgaccagctaccctcgcccaagactcccacc
cacacatctgttctgcagttacagcagcaatgcccacctctgtcccccagatctacaccg
gtatcaatgagctctcctttccaagggatgcagactgtctttaaagttaatgcccctctg
cccctacacaaagagcaagagctgaaggtcgaggctccatattccacgggttaccaccaa
accttcactacagcaagtacccaaacgctgcctcactgcatgttggacaccagctttggg
gatcagaactctctcatacaagaacctctaccaggaagcccatatccatcaaccggaatt
caggtgaatgggagccttccatgttacacatccagtccgaacctcctgccaaggatgacc
ccaccttttgttagcagccgggggactatcagaggaacaagcagaggaagagtaatgacg
aatgggtatcgttgcccaactgggtataaaggtccggagagttacagaggggctcagtgc
ataaacaatggaagctttgctcatggtcagtgcccaggccgggagtacccggctacacag
tttatacccagggatggaagctcaactctattccataaacggggaaccaatactataacc
cgaatgaattcaagaggctttagcgaatctcctcagatgaacagcccagacaaggaagac
agcttcaacagcacagattcggggcatggtgaaacgcgtagcctcagttcgctggatatg
tctatgacaaaccaagcggccaccatcttgccggtccatgtctatcctctccctcagcaa
atgcgagtggctttctctgcagccaggacgtccaactttgccccgggcactctagatcag
ccgattgtgtttgacctgttgctaaacaacctcggcgacacgttcgacttccagggtggg
cgtttcatgtgtccagtgaatggaacctatgtcttcatcttccacatgctaaagctagcg
gtgaatgtcccgctgtatgtcaacctcatgaagaacgaggaggtgcttgtgtctgcttac
gccaatgatggagccccagaccacgagactgcaagcaaccatgctgtcctacagctcttc
cagggagaccagatatggcttcgcctacacaggggagcgatttatggcagcagttggaaa
tactccacattttctggctaccttctgtaccaggactga
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