Xenopus tropicalis (tropical clawed frog): 100145553
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Entry
100145553 CDS
T01011
Symbol
nectin1l2.2
Name
(RefSeq) nectin-1 isoform X2
KO
K06081
poliovirus receptor-related protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03266
Virion - Herpesvirus
xtr04514
Cell adhesion molecules
xtr04520
Adherens junction
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100145553 (nectin1l2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100145553 (nectin1l2.2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100145553 (nectin1l2.2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100145553 (nectin1l2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100145553 (nectin1l2.2)
04090 CD molecules [BR:
xtr04090
]
100145553 (nectin1l2.2)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Nectin family
100145553 (nectin1l2.2)
CD molecules [BR:
xtr04090
]
Proteins
100145553 (nectin1l2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set_2
Ig_4
MauE
DUF2542
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
100145553
NCBI-ProteinID:
XP_002940971
Xenbase:
XB-GENE-5962435
UniProt:
A0A8J0QXD1
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All DBs
Position
2:7533284..7552851
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AA seq
383 aa
AA seq
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MSVPLFLWGRSVSLILLLFVPGSPQVSVIVDREVNAKLGSDTKLSCKVKTPDIISQVTWQ
RKLSPNNENFLTYSKGEEPMHLTPFGQRVKFLGNGDLGGSILIPNVTLADQGTYLCIFTT
FPGGTKEGEIHLSIWVEPSVEVQLNPVLSGPNPVIIAECVAFASKPAANISWDTYGLPHS
STETPVQHSNGTVSVRSQLWMVPSPGLNGHQATCLVSLPEQMYEKLIHMNITNIQYAPQA
VHIKVIQRDPLYIECGADGNPPVTYTWSRGNRSITDDEAQVTDNTLYFPRRNRDNNGLYV
CEATNSIGRNSTSVYLYKYSDAVPRGSYGAYIAAIVIQSFIILGMVVYFIRREGMFNCRC
IEGQNPPEERDESRHLDAVLSAV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaccgctatttctgtggggccggagtgtgagcctcatcctcctgctgtttgta
ccggggagcccgcaagtctcggtgatcgtcgatagagaggtaaatgccaagttggggtcg
gacaccaagttgtcctgcaaagtgaaaacccccgacattatctcccaagtcacttggcag
aggaagttgtcgcccaacaatgagaatttcctgacctacagcaaaggggaggaacccatg
cacctgactccgtttgggcagagagtgaaatttctgggcaacggggatctgggaggctcc
atactgattcccaatgtaaccctggccgaccagggcacctacctctgtatcttcaccaca
tttccaggaggcacaaaggaaggggagattcatttatccatctgggtggagccgtcggtg
gaagtgcagctaaatccagtgctgtcggggccaaatccggttattattgctgaatgtgta
gcctttgcctccaaacccgcagccaatatcagctgggatacatacggcctcccccactca
tccactgaaaccccagtacagcattctaatgggacggtgtcggtacggagccagctatgg
atggtgccttctcctgggcttaatgggcatcaggcaacttgtctggtttctctgcctgag
caaatgtatgagaaactgatacatatgaacattacaaatattcagtatgcaccccaggct
gtacatatcaaagtaatacagagagaccctctgtatattgaatgtggggcagatggcaac
cctccggtcacttatacatggagcagggggaatagatccattactgatgatgaggcccag
gttacagataacactctgtattttcccagaaggaatagagataataatggcctgtacgtc
tgtgaggccacaaacagcattgggagaaactcgacgtcggtctatttatataaatactca
gatgctgttccccgagggagctacggcgcatatattgcagccattgttatccaaagcttt
attattcttggaatggttgtgtactttatacggagggaaggaatgtttaattgtaggtgt
atagaagggcagaaccctcctgaggaacgggatgaatcaaggcatttagatgctgttctg
tcagccgtgtag
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