Xenopus tropicalis (tropical clawed frog): 100145565
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Entry
100145565 CDS
T01011
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100145565 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100145565 (rexo1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-60S particles
RNases
100145565 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
TIL_2
Motif
Other DBs
NCBI-GeneID:
100145565
NCBI-ProteinID:
XP_002938865
Xenbase:
XB-GENE-961786
UniProt:
F6UXA0
LinkDB
All DBs
Position
1:98319092..98345896
Genome browser
AA seq
1135 aa
AA seq
DB search
MLKNTGYFRGLECPFRECCRRPYCHFRHRGRAAGNVVTEEARVGAEYDPYSPELPTVPDN
ADDDVLGAISEPRLDILELERVNKAIEAVKSEVEREQRKYKELLETKKEYNASPSRPSQT
DAYSPLEYNPGSCKNGTTDYNPTPLSKSDKTFCKYTLNDSDEGNSKGRFMEYVPTAVAPV
SKYKANKYVIDNSKPPTDLEYDPMSNYSARLLSKERERKGTKRCRLENNEETYSPSAKKV
CSSASEIVVEAQFSDSEEEIESQSATIKDKKIPSKMKKEVLPTHKATKTGGKDKSSGEIK
EMAVQYNMEDIGQLVTNQIKAPFVSKSGSTKEKKGKVHHFVKTKTDTNTGINKADKESVP
KKQKPESHKPDKGKSKNHKTDKRSSVKPCSDSSKKEKLVKKLSKEKPVKFEKDTKGGVKN
GKYKTKDLKREISEKAKTSTGIIKAKSKQRSLSHVDLFGDESSDEDIKKKKVGSRDARPG
SNKGEYIDTEEHCSMQNSKALQRPSTSSVDEIDYSLLEKEVDSDSDPMEECLRVFYESQD
VKTEDKGRMANQPQVQSKISEDNLTTLFPGQKKRISHVTNPANEDVPSKPVILPCRRPTP
QEMCYLRIQQAQEQAVQLLAQQEVIKLTSTVHKTSLSQPGAKKRIAHVPGLPSPSSQALS
PEINKSASVGMVPSPSSLSSAIKTRTLSGMASKTTTAAVQKRQAHAPSLQSSTLKRPVIP
TEFGAKVPTTVRQRYLNLFIDECLKLCASQQEAFDKALTEEKGVYSRSTSRNIYLNVAVN
TLKKLRNEGPSNNTSSSKSTNKKAVSHEAVLGGKLAAKNSFSVLSNSGHKDEKLSDAALY
TKLKDYMLTEEDQQEHGYPMAHPDKAGKALLFNAEEKRNSDSSCRVCCRCGAEYSVSTSG
NCVRREECIYHWGRLRRQRVHGALETHYNCCSGAVGSTGCQTAKQHVHDGRKENLDGFVK
TFEKPQPVDGNPGIFALDCEMCYTTQGLELTRVTVINSELKVVYDTFVKPDNKIVDYNTR
FSGVTEEDLQNTTMTLRDVQAVLLCMFSSKTILIGHSLESDLFALKMIHPTVVDTAIVFP
HRLGLPYKRALRSLMADHLKRIIQDSVGGHDSSEDACSCMELMIWKVKEDAKVKR
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaataccggttacttccgggggctcgaatgcccatttagggaatgttgccgg
cgcccgtactgtcactttaggcaccgggggagggcggccgggaacgtagttactgaagag
gcccgagtcggggcggaatatgacccatacagtccagagcttccaactgtgccagacaat
gctgatgatgatgtactgggagctatttctgaaccaagattggatattttggagctggaa
agagtcaacaaagctatcgaggcagttaagagtgaggtggagagagagcaaagaaaatat
aaggagttgcttgagacaaaaaaggagtacaatgcttccccaagcaggccttcacagact
gatgcttattctccactggaatataacccaggaagctgcaaaaatggcacaacagactac
aatcccacaccactatcaaaatcagacaaaacattttgtaaatataccctgaatgattct
gacgaagggaacagcaagggtaggtttatggagtatgttccaactgctgttgcaccagtc
tctaaatacaaagcaaataagtatgtaattgataattctaaaccacctacagatctagaa
tatgaccccatgtccaactactcagctagacttttaagcaaagagagagagagaaaaggg
accaaaagatgcagactagaaaataatgaagaaacgtactccccatcagcaaagaaggtt
tgcagcagtgcctctgagattgtggttgaagctcaattttctgattctgaagaggagatt
gaatcacagtctgctacaattaaagacaaaaaaattccatccaaaatgaaaaaggaagtc
ttgcccacacataaagccaccaagactggaggaaaggacaagagttctggagagataaag
gagatggctgtacagtacaatatggaagatattggtcagttggttactaaccaaattaaa
gcaccctttgttagcaagagtggctcaacaaaggagaagaagggtaaagtacatcatttt
gtaaagacaaaaactgatacaaataccggtattaacaaagctgataaagagtctgttcca
aaaaaacaaaaaccagagtcccacaaaccagataagggtaaatccaagaatcataaaacg
gacaagagaagttcagttaaaccctgttcagactcaagtaaaaaggagaagctcgtaaaa
aagttaagcaaagagaaaccggttaagtttgaaaaagacacaaagggcggggtgaaaaat
ggaaaatataaaacaaaggatctgaagcgtgaaatatcagaaaaggcaaagacatctaca
ggtattataaaggctaagtcaaagcaacgctctctcagtcatgtggatttatttggggat
gaaagtagtgatgaggatataaaaaagaaaaaagttggctcacgtgatgctagaccaggg
tccaataaaggagagtatattgacactgaggaacattgcagtatgcagaatagcaaggct
cttcaaagaccgtcaacgtcatctgtggatgagattgattattcactgctagaaaaagag
gtggattctgactctgatccaatggaggagtgcctgcgggtattttatgagtctcaagat
gtaaaaactgaggacaagggcagaatggcaaaccagcctcaagtacaaagcaagatatca
gaagacaatttgaccactttatttcctgggcagaagaagaggatttctcatgttaccaac
ccagctaatgaagatgttcccagcaagcctgtaatcctaccatgccgccgcccaacacct
caagaaatgtgttatctacgaatccagcaggcacaggagcaggctgtgcagctccttgca
cagcaggaagtaataaagctgacaagcactgttcataaaacttcactgtctcagccaggg
gcaaagaagagaatcgcacatgtgcctggtcttccatcacccagtagtcaggcactctcc
ccagagataaataaatctgcttcggttggtatggttccatcaccaagtagtttatcctct
gcaattaagactcgaactctgtctggcatggcatccaaaaccaccaccgcagcagtgcaa
aaaagacaggcacatgcaccatccttacagagttccacactgaagagaccagtaattccc
actgaatttggtgctaaagttccaactactgtacgacaacgatacctcaacctctttatt
gatgagtgcctaaagttatgtgcttcacaacaagaggcatttgacaaggctctcactgag
gagaaaggtgtctatagtcgtagcaccagtcgtaatatttacttgaatgtggcagttaac
actttgaagaaactgagaaatgaaggaccaagtaataacacctcttcatctaaaagcacg
aacaagaaagctgtatctcatgaagctgtcctgggagggaagctagcggcaaaaaacagt
ttctctgttctgagtaacagtggtcataaggatgagaaactttcagatgccgctttgtat
acaaaactaaaagattatatgctaactgaagaggatcagcaagagcatggatacccgatg
gctcatcctgataaagctggaaaagccttgctttttaatgcagaggaaaagaggaactct
gattcttcctgcagagtgtgctgtcgctgtggagcagaatattcagtatccaccagtgga
aactgtgtacgcagagaggaatgcatctatcattggggtcgtctgcgcaggcagagagtg
catggtgctttggaaactcattacaattgctgctctggagctgttggatcaactggttgt
caaacggcaaaacaacatgtgcatgatggccgtaaggagaacctagatggatttgtgaaa
acatttgagaaaccacaacctgttgatgggaatcctgggatttttgccttggattgtgaa
atgtgctacaccacgcaaggcctggagctgacccgtgtcacagtcattaactcagaactt
aaagttgtatatgacacttttgttaaacctgacaacaagattgtggattataacacaaga
ttttcaggcgtgacagaggaggatttgcagaatactactatgacgcttcgggatgtacag
gctgtcctcctctgcatgtttagctctaaaacgatcttgattggtcacagcttggaaagt
gacctatttgcactaaagatgatacatcccactgtggtagatacagccatagtcttccct
catcgtttgggattgccatacaagcgggctttgagatctttaatggcagatcacttgaaa
cgtattattcaggacagtgtggggggtcatgactccagtgaagatgcgtgttcctgcatg
gagctcatgatctggaaggtaaaggaagatgctaaagtgaaacgatga
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