| Entry |
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| Symbol |
xpc
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| Name |
(RefSeq) DNA repair protein complementing XP-C cells isoform X2
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| KO |
| K10838 | xeroderma pigmentosum group C-complementing protein |
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| Organism |
xtr Xenopus tropicalis (tropical clawed frog)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:xtr00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100145629 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:xtr03400]
100145629 (xpc)
DNA repair and recombination proteins [BR:xtr03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100145629 (xpc)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:132921677..132937060
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| AA seq |
1055 aa
MAKRRGSEGAAVAGNKQRNRPAIDSLHGDDEDKFYEEKRPPVKKSKDSCGDSLTKQSCVA
KRPTVNDGKTVGKQTQDPPNLKIKTPVKKFSGSKDAEESEDEWEDVEANNQPQTGKTKRT
GSENSKAGVKKERRLSVKSNIRKRSRPGDLDDGEDGFKEESSVKKRKPTVPGVKGKTKAA
KPAGNASCAGNQKPRAKKSAVREPKTQETEILDLLALEKKTPRKGATVKESSESEEAEDS
DEEWEDVEELNGSVLDDLQASTSADIPLPTQPVEIEIETAEAAKKRLRREKRKEEFAAYL
RRLMKKVREDTHKVHLLCLLANGFYRSNTCNLPDLQAVALSVVPVKFTSVPADRVDVVYL
TNLTKWFRGTFTLSHEMSLDESESMSATLERRFGVYGVRDEAEMVHVFLILLRALQLLSR
LVLSLQPIPLKDPPAKTKQPRKEKSSTRSSTKPQTAKGKSKSNNRKQVRQKKVKQEDSLS
GESEEEEEYPVDCTTSGRGKGKTTKGKKAVKSADKEEACTGARPKNQLRRKAASKVTYKE
ESESCGHSSDSDFCLSASQDSDCSEWEEEPLDSKRRRSSGPVKEIIKMERNTNPVAKEQP
RAKNPTDSLSSTQPKRRGKIISTDESEMDDEGTMEKASVVSPIVCDQWVEVYLESERKWL
CVDCVHWTVGKPQMCFNTATKPVTYVVGIDNAGCVKDVTRRYDVDWMTSTRKRRVEPDWW
EETLMPYKNPDADREDREEVELEFKLLDQPLPTSITGYKDHPLYVLKRHLLKYEAIYPET
AAILGYCRGEAVYSRSCVHTLHSSDTWLKEARVVRLAEVPYKMVKGYSNRARKARSSDPQ
KKDHNDLGLYGLWQTEEYQPPLAVDGKVPRNEYGNVYLFQPCMLPIGCAHLRVPNLHRVA
RKLDIDCVKAITGFDFHGGYSHPVNDGYVVCEEHKDILLAAWENEQADIEQKQKEKREKR
ALGNWKLLVKGLLIRERLKARYGNKDTELPGLSTGTNDFSSDEEEKPKTETPAQDMAVSW
PQNRQAEHTQAEKTQRKSKKQKKGEENHLFPFEKL |
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| NT seq |
3168 nt +upstreamnt +downstreamnt
atggcaaagcggagggggtctgagggtgctgcggtagcggggaacaagcagagaaaccgc
ccggcaatagactccctgcatggtgatgacgaagataaattctatgaagagaagagaccc
ccagttaagaagagtaaagattcctgcggtgacagtctgacgaagcaaagttgtgtagcc
aagagaccgactgtaaatgatgggaaaacagttggaaaacaaacacaagatccaccaaat
ttgaagatcaagacgcctgttaaaaagtttagtggctcgaaggatgcagaagagagtgaa
gatgagtgggaggatgtggaagcaaacaatcaaccacagactgggaaaactaagaggaca
gggtctgaaaattcaaaagcaggagtgaagaaagaaagaaggctctcagtcaagagcaat
ataagaaaacggtccaggcctggtgatctggatgatggtgaagacgggtttaaagaagaa
agttcagttaagaaaaggaaacccacagtcccaggtgtaaaaggcaaaactaaagctgct
aaacctgcaggcaatgcatcctgtgcaggaaaccagaaacctcgagccaagaaatcagct
gttagagaaccaaaaacccaagagactgagatacttgatctgctggctctggagaaaaag
acaccgagaaaaggtgccactgttaaagaatccagtgagtcggaagaggcagaggatagc
gatgaagaatgggaagatgtggaagaattgaacgggtcagtgctagatgacctccaagcc
tcaacttcagctgatattcctctccccacacagcctgttgaaatagagattgaaacagca
gaagccgctaagaaaagacttaggagagagaagaggaaggaagagtttgctgcatacctg
cgcaggttaatgaaaaaggtgcgggaagacactcacaaggtacacttgctttgcctgttg
gcaaatggcttctatcggagcaacacttgtaacttgccagatctccaggctgttgccctg
tctgtggttcctgtgaaattcaccagtgttcctgctgatcgtgtagatgtggtttatttg
acgaacttgacgaagtggtttcgtggaacctttactctgagccatgagatgtctctggat
gagtctgagtcaatgtcagccaccctggagagaagatttggagtctatggtgtgagagat
gaagcagagatggtccatgtatttctcatcctcctgcgcgctttgcagcttctgagccgt
ctggtgctgtctctgcagcccattcctttaaaggacccacctgcaaagaccaaacaacca
cgaaaagaaaagtcctccacgaggtccagtactaaaccacaaacagccaaaggcaagtcc
aagagtaataacaggaagcaggttaggcagaagaaggtaaagcaagaggattctttgtca
ggggaaagtgaagaagaggaagagtatccagtggattgcactacatctgggaggggaaaa
ggcaaaactaccaaggggaaaaaggctgttaagagtgcagataaagaggaggcctgcaca
ggggcccgacccaaaaatcagctcaggaggaaggcagcatcaaaagtcacttacaaagag
gagagtgagagctgtggtcacagtagtgattcagacttttgcctttctgccagccaggac
agtgactgttctgagtgggaggaagaacccttggatagtaaaaggagaagatcatctggg
cctgtaaaggagattattaagatggagaggaataccaatccagttgccaaagaacagcct
agagctaaaaacccaaccgattctcttagcagcacacagccaaagagaagaggcaaaatc
atctccactgacgagtcagaaatggacgatgagggcacaatggagaaagcttctgttgtg
tcccctattgtttgtgaccaatgggtagaagtttatttagaaagtgagaggaagtggctg
tgtgtagactgtgtgcattggactgtagggaaacctcaaatgtgctttaatactgccacc
aagccagtcacttacgtggtggggattgacaatgctgggtgtgtaaaggatgtgacacgc
aggtatgatgttgattggatgacaagcacacggaaacgtcgcgtggaacctgactggtgg
gaagagacactgatgccctataagaaccccgatgctgaccgcgaggacagagaggaagtc
gagcttgaatttaagctacttgatcagcctctgccaacatccatcaccggatacaaggat
catccactgtatgtgctgaagaggcatctgctgaaatatgaggctatttatccagagact
gctgccatcttgggctattgccgaggggaagccgtctattccagatcctgtgttcatacc
ctgcactcaagtgacacttggctgaaagaagcccgagttgtaaggttggcagaagtgccc
tacaagatggtaaaaggatactcgaatcgtgcgaggaaagcgcgtagtagtgatccacag
aagaaggaccataatgacctgggtctgtatggcctttggcagactgaggaatatcagccc
ccgcttgcagttgatgggaaggttccacgcaatgaatacgggaatgtgtatttgttccaa
ccctgcatgttgccgattggctgtgcccatttacgtgtccccaacctgcacagagtagcc
aggaagctggacattgactgcgtcaaagccatcacgggatttgactttcatggtggctac
tcacaccctgtaaatgacggttatgtagtctgcgaagaacacaaggacatccttctcgct
gcttgggaaaacgaacaggcggatatagagcaaaagcaaaaagagaaacgtgagaaacga
gctctgggcaactggaagctgctggtaaaaggacttctgatccgagagagactgaaagcg
cgttatggcaacaaggacacagaactgcctggcttatccactggaacaaatgatttctct
tcagatgaagaggagaaaccaaagacagagacccctgctcaggacatggctgtctcctgg
ccacagaatcgccaggctgaacacacacaagcagagaaaacacagaggaagagcaagaag
cagaagaaaggggaagagaatcacttatttccctttgaaaagctttga |
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