Xenopus tropicalis (tropical clawed frog): 100145665
Help
Entry
100145665 CDS
T01011
Symbol
dmxl2
Name
(RefSeq) dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100145665 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100145665 (dmxl2)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100145665 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
100145665 (dmxl2)
RAVE complex
100145665 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
VPS11_N
Motif
Other DBs
NCBI-GeneID:
100145665
NCBI-ProteinID:
NP_001120527
Xenbase:
XB-GENE-1004082
UniProt:
A0PJP6
A0A8J0QBK1
LinkDB
All DBs
Position
3:complement(102629196..102703214)
Genome browser
AA seq
3024 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVNDIPFTAYGSGCDIVILANDFECVQIIPGAKHGNIQV
SCVECSQQQGRIAASYGNTVCIFEPFENINSHKRNSQLKKQWLRTGQFLLSSVTYNLAWD
PQGNRLLTATDYLQLWAPPSSDILEEEEDDMEESPVMENKVHPALNDWNCIWQCKTAVSV
HLMKWSPDGEYFATAGKDDCLLKVWYPLTGWKSTFLPQEYQEKRGSVKDVHFSFVYLAHP
RAVIGFSWRNTSKFMPRGSVCNVLLTSCQDGICRLWAETLLPEDSLLGGQIIEQNSYSSS
LSHIGKQKDKIEHALETIHHLKHLRRGRRRSSVLASHTEVLPSQLSQHDVHHHISHHASS
LCHFHIAASINPNTDIPSVLAGTAFNLEEGYGGFVVHWLNNKELHFTLSVELFVQYLKNI
VEQQTDEGDEEEEEEGLLMKLDNGEPEGGGSLTGSPEHEEAEKDLSTKASSPGTTLPLPT
DLLDRKIESLLSEWNRNADMLFTIHPVDGTFLVWHVKYLDECNPGIFRQVQVSFSSRIPV
AFPSGDASSLSKNIMMYACTTSIREAVSAALQQERMTSTISGVNSLTCTKDLLNKNVKSS
TVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNDLACHSVLPLLLTS
SHHNVLTTPDTDNPWELERSSKVTDPMKNLKGFPRQHFRNAATQTFHDPNAIYSELILWR
VDPIGPLSYSGGVSELARINSLRTAAFCNVAWLPTLIPSYCLGTYCNSASACFVASDGTN
LRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITDKCGSSTQL
LHVFQEDFILGYKPYKEEMKEKETEVFFQPSQDRASRTESSIEGYRPPPFSEKFFLVVIE
KDLNNRSILNMWHLHLKSVQAFVAKPAEVTVSENFLNVPGQKTAESSPDTSPGTSPMTRS
ASIANLQTASKLILSSKLVYSEPLNIPRGVEVIRATPSAGHLSSSSIYPVCLAPYLLVTT
CSDNKVRFWKCNVKLFQDGENEEKHSYQWKEWSLMNDGQDESTSSVTVAGKPVAVSCSYT
GRLAVAYKQPIQHNGFVSKEFSMHVCLFECESTGGSEWVLEQTIHLDDLIRIGSMLDARV
SVDSNLFVYSKSDVFLNNDKHLMPNIKHLVHLDWVSKEDGSHILTVGVGSNIFMYGRLSG
IVTDQTNSKDGIAVINLPLGGSIKQGIKSKWVLLRSVDLVSSVDGTPSLPVSLSWVRDGI
LVVGMDCEMHVYAQWKQGMTSGDSETTASEDKVHKSQSELFQTHLVSKKTSVIDGAAIVD
DVFGGPTVIQDGGLFEAAHVVSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEV
ALVKDLDAGDEAAPKRHLSRTISVSGSTAKDMIITGKDVTREYTEIDSIPPLPLYALLSA
DQDAPYSITEETTKMSQTSKCSFDTKAEDQYSDLFTVQTVTTDDFIGFETEKRESKSKVI
NLSQYGPTYFGREHASVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTEVVGSRNNNY
TGGDNLDECGIRYLLAMRLHTCLLTSLPPLYRIQLLHQGISTCHFAWAFHSEAEEELINM
IPAIQRGDPQWSELRAMGIGWWVRNINTLRRCIEKVAKAAFQRNNDPLDAAVFYLAMKKK
AVLWGLFRSQHDEKMTQFFSHNFTEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKD
AIEVCLEKMEDIQLAMVIARLYESEFDTSSTYESLLYERVLGCQKDGTSFCCTKLHPDPF
LRSIAYWIMKDYPKALDTLLEQTPKEDDENPILIKSCNPVVFSFYNYLRTHPLLIRRHFG
APEATTKNYVDEITLIERKLFFTTANAHFKVGCPVLALEVLSKIPQLTKLFPINEEDTGL
PLFGKSSVQSANKLSINREVSEPASTLIKVTAFEDSTSNFDWGLSAMKVEDEQLQLDWGD
DKENETDDDDDLQLKTLEKSDHKIKDVSEKVQPAEIISGGNEVDVIAEQLKFRACLKILM
TELRTLATGHEVDGGKLRFQLYSWLEREIAAMHKIFNHESDSKDYSSETHESSEILDPQE
EKTDIGSYERHQIERRRLQAKREHAEKRKRWLQKNQALLRVFLSYCSLHGAQGGGLASVR
MELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASVAVTKTVIANPVLYLNNHIHDILYT
IVQMKNPPHPDNKDPKVDTLHLLGASLSASIYQALCDSHSYSSQGEANQFTGMAYQGLLL
SDRRRLRTESIEEHATPNSTPASWPGVSSLINLLTTAQDEDQPKLNILLCEAVVAVYVSL
LTHALATDSCSQMFRLAAHPLNSRMWAAVFGGGVKLVVKPRKPPESVPAIPALSEEIDKH
RRRFNMRMLVPGRPVKDVAVPPPVPTERPTYKEKFIPPELSMWDYFVAKPFLPLSDSGVI
YDSDESIPSDEEEDDDAFLSDTQLQEHTNSSSYSWTLIRLAMVKLAIHNLKQFFPTAGLE
FSDLPVTSPLGIAVVKNLENWEQILQERMDEFEGPPPNYINIYPSELAAGAGPAALRLKA
LLDAENTPFKSKDYSAFPLRRLWHFLVKQELLQDSFIRYAFTKKRKQSEVEADLGYPGGK
AKIIHKESDIIMAFAVNKANNNEIVLASTHDVQELDVSSLLAAQPYIWIGEEYDRESKSS
DDLDFRGSLSAIPQSNVASFSLSQMQSSSSMPWLGSGQTATGAGVIIKRNLNNVKRMASH
PVHQYYLTGAQDGSVRMFEWSRPQQLVCFRQAGNARVTRLYFNAQGNKCGVADGEGFLSI
WQVNQNVTSPKPYLNWQCHTKTTSDFSFITSSSLVATAGQSSDNRNVCLWDTLISPNNSL
VHAFNCHENGATVLQYATKQQLLITGGRKGGICIFDIRQRQILHSFQAHDSAIKALALDL
SEEYFVTGSAEGNMKVWKLTGHGLIHSFKNEHAKQSIFRNIGAGVMQIEVGENKRIFSCG
ADGTLKMRMMPAALKTQSGIFDIL
NT seq
9075 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacaccaggtgctgaccggggcggtgaacccgggggacaactgctactcggtg
ggcagcgttaatgacattccattcacggcctatggatcagggtgtgacattgtcatacta
gcaaatgactttgagtgtgtacaaatcattcctggtgctaaacatggaaatatccaagtt
agctgtgtggagtgttcccagcagcaaggcaggattgctgcatcttatggcaacactgta
tgtatatttgaaccatttgaaaacataaactcccacaagcgaaatagtcaactgaaaaaa
cagtggctcagaactggacagtttctcctgagttcagtgacttacaatttagcatgggat
ccgcaaggtaaccggttgttaacagctactgattatttacaattatgggccccgccatcc
agcgacattctagaggaggaagaagatgatatggaggaaagccctgtcatggagaataaa
gttcatcctgccctgaatgactggaattgtatctggcaatgcaagactgctgtctctgtg
catctgatgaaatggtccccagatggtgaatattttgcaacagcaggaaaggatgactgt
ctgctaaaggtttggtatccacttactggttggaaatcgactttcttacctcaagaatat
caagaaaagaggggaagtgtaaaggatgtgcacttctcttttgtttacttggctcatccg
agggcagtgattggcttttcatggaggaatacaagcaagtttatgccaaggggttctgtg
tgcaatgtgctactgacatcctgccaggatggtatttgtcgtctctgggccgaaacctta
ttaccagaggacagtttacttggaggtcaaataattgagcaaaatagctacagcagcagc
ctgtctcatatagggaaacagaaggacaagattgaacatgcacttgagacaattcaccat
ttgaaacatttgagaagagggagaaggagatcttctgtccttgcaagtcacacagaagta
ctgccaagtcagctaagtcaacatgatgtccatcaccacatttcccaccatgctagctca
ctgtgtcacttccatatagcagcaagcattaatccaaacacagacatcccttctgtattg
gctggaactgcatttaatttagaggagggctatggtggctttgtcgttcattggctaaac
aataaggaattgcactttacattatcagttgagctgtttgttcagtatttaaaaaacatt
gttgaacagcagactgacgagggcgatgaggaagaggaggaagagggactccttatgaaa
cttgataatggtgagcccgagggtggaggatcacttacaggctctcctgagcatgaggaa
gcagaaaaggatttgagcaccaaagcatcttcacctggcactacactgcctttacccacc
gatttactggaccgcaaaattgaatcccttctttctgagtggaacagaaatgcagatatg
ctgttcacaattcaccctgtagatggcacctttcttgtgtggcatgtaaaatatttggat
gagtgcaatccagggatctttagacaagttcaggtctctttttcttctcggattcctgtt
gcttttccttcaggagatgccagctccctcagcaaaaacattatgatgtatgcttgtact
acctcaatcagggaggctgtgtctgctgccctgcagcaagaaagaatgacttccaccatc
tctggtgtaaattcattgacttgtacgaaagatcttctaaacaagaatgttaaatcttca
acagtcatgatggtgtcaaagcacatcgatggatccttaaatcagtgggcagttactttt
gcagacaagtctgcctttaccactgtgcttactgtgtctcacaagtttagatattgtggc
cacagattccacttaaatgatcttgcctgccactctgttcttcctttgctgctaacttca
tctcatcacaatgtgctgacaaccccagacactgacaatccatgggaattggaacgaagc
agtaaagtaacagatcccatgaagaacttgaaaggttttcctagacaacacttcagaaat
gcagctactcaaacctttcatgatccaaacgcgatttatagtgaacttatattatggcgt
gttgatccaattggtcccttatcatacagtgggggagtttcagaactagctcgtataaac
tctctgcgtactgctgctttctgcaatgtggcatggcttccaacacttataccaagttac
tgcttaggtacatactgcaactctgccagtgcttgctttgttgcttctgatgggacaaat
ttaaggctctaccaggcagttgtagatgcacggaagcttctggatgagttgtcagatcca
gagtcctctaaacttattggcgaagtatttaacattgtgagtcagcaatctacagctcga
cctgggtgtatcattgaacttgatgcaataacagacaagtgtggttcaagtactcagcta
cttcatgtctttcaagaggattttattttgggttataaaccttataaagaagaaatgaag
gagaaagagacagaggttttcttccagccttcccaagatagggcctccagaactgaaagc
agtattgaaggttatcgtccaccacctttctctgagaaattctttcttgtggttattgaa
aaagatcttaacaaccgctccattttaaatatgtggcaccttcacttgaaatctgtccaa
gcttttgtggcaaagcctgctgaagttacggtatctgaaaactttcttaatgttcctggg
caaaaaactgcagaatcctcacctgatacgtctcctggcacaagccctatgacacgatca
gcatcaattgctaaccttcagaccgctagcaagctaattctaagctcaaaacttgtgtat
agcgaaccactaaatataccaagaggtgtagaagtgataagggcaactccatcagcaggc
cacctaagttcatcttctatttacccagtgtgccttgcaccataccttctggttacaacc
tgctctgataacaaagtgcgattctggaagtgcaatgtaaagttatttcaggatggtgaa
aatgaggaaaagcatagctatcagtggaaagaatggtctttaatgaacgatggacaggat
gaaagtaccagttctgtaactgttgcaggaaagccagttgcagtaagctgttcttataca
ggaaggcttgcagtggcatacaagcaacccattcagcataatggttttgtttccaaagaa
ttttctatgcatgtctgcctttttgaatgtgaatctactgggggctcagaatgggtatta
gaacaaacaattcatcttgatgacttgatcagaattggcagcatgcttgatgctcgtgtc
agtgttgatagcaatttgtttgtgtacagtaaatcggatgtgttcctaaacaacgacaaa
catctaatgcccaacataaagcatttagtacatttagactgggtctcgaaggaagatggt
tcacatatactaactgtgggagttggctctaatatttttatgtatgggcgactctccggt
attgtaacagatcagaccaacagcaaggatggaattgctgtcattaatttgccactaggt
ggtagtataaaacaaggcattaaatccaaatgggttttgctgagatcagttgacttggta
tcttctgtggatggcactccttcgttgccagtttctttgtcgtgggtcagagatggaatc
ctggtggttggaatggactgtgaaatgcatgtgtatgcacagtggaaacaagggatgacg
tctggtgatagtgaaaccacagcaagtgaagacaaagtacataaatctcagtctgaattg
tttcagacgcatcttgtcagtaagaaaactagcgttattgatggagcagctattgtagat
gatgtctttggcggcccaactgtaattcaggatggaggcctttttgaggctgcccatgta
gtatccccaacccttccacagtaccaccctactcagttgcttgaactaatggacctggga
aaagtaagaagagcaaaagcaatactttcacatttggtaaaatgcattgcaggagaagtt
gccctagttaaagacctagatgctggagatgaagctgcgccaaaacgtcatctttcaaga
actattagtgtaagtggcagcactgcaaaagatatgataattacagggaaggatgtaacc
cgagagtacactgaaatagattctatccctccactgccactatatgcccttctttctgca
gaccaagatgccccatattcaattacagaagaaactacaaagatgtctcagacctcaaaa
tgcagctttgatactaaagcagaggaccagtattctgatttatttactgttcagaccgtg
acaaccgatgattttattggttttgaaactgagaaaagagaaagtaaatccaaagtaatc
aacctgtctcaatatggtccaacctactttgggcgcgagcatgccagtgtgctttccagc
catcttatgcactcaagtttgccaggcctgacccgtttagaacagatgtttcttgttgct
ttagcagacactgtagccacgacgagtacagaagttgtaggaagcagaaataacaactac
acagggggagacaatctggatgaatgtggcataagatacttgctggccatgcgtttgcac
acctgcctactgacatcacttccgcctctatacagaattcagttgctccaccaaggcata
tccacctgtcattttgcttgggcatttcactcagaggctgaagaggagttaattaacatg
attcctgctattcaacgtggtgatccacagtggtcagaactaagggcaatgggtattggt
tggtgggtccgtaatatcaacacactcagaagatgcatagagaaggttgctaaagcagcc
tttcaaagaaacaatgacccattagatgctgcagttttttaccttgcaatgaagaagaag
gctgtgctttggggtctcttcagatcccagcatgatgaaaaaatgacacagttctttagc
cataattttactgaagatcgatggcgcaaggcagcattaaagaatgctttctcgttgctt
ggaaaacagcgttttgagcagtctgctgccttcttcttactggctggctcattaaaggat
gctattgaggtatgtttggaaaaaatggaagacattcagctggcaatggtaattgcccgt
ctatacgaatcagaatttgatacatcatcaacatatgaatctctgctctacgaaagagta
ttgggatgccagaaggatggtacaagtttctgctgcacaaaactgcaccctgatcccttt
ctgagaagtattgcctattggataatgaaggactatccaaaggcattagatactctgctg
gagcaaacacccaaagaagatgatgaaaaccccattcttatcaaatcatgcaatccagtg
gtcttcagtttctataattaccttcggactcaccctctgctgatccgcagacattttgga
gctcctgaagcaaccacaaagaattatgtggatgaaattacacttatagaaagaaaattg
tttttcactactgcaaatgctcatttcaaagttggatgtcccgttcttgcactagaagtt
ctatcaaagattccccaactaaccaaactatttcctattaatgaggaagatacaggtttg
cctttgtttggcaaaagcagtgtacaatctgctaacaaacttagcatcaatagagaagta
agtgaaccagcatcaacattgataaaagtgactgcttttgaagattctacttccaatttt
gactgggggttgtcagctatgaaggtagaggatgagcaacttcagctagactggggtgat
gataaggaaaatgaaacagatgatgatgatgacttacaattgaaaactcttgaaaagagt
gatcacaagataaaagatgtaagcgaaaaggtgcagccagcagaaatcatatctggtggc
aacgaagttgatgtgattgccgaacagctcaagttcagagcatgtttgaaaattctcatg
actgaacttagaactttagctacaggacacgaagtagatggcggaaaattgagattccaa
ctctatagctggttggagagagaaatagctgcaatgcataaaatattcaaccatgaatct
gacagtaaagattattcaagtgaaacccatgaatccagtgagattttagatcctcaagaa
gaaaagactgatattggatcttatgaacggcatcagattgaacgccgcaggttgcaagcc
aaacgtgaacacgcagagaaacgaaagcgatggctgcaaaaaaatcaggctttgttaagg
gtatttttgagctattgcagcttacacggtgcacaagggggtggcctggcctctgtacgg
atggaacttaaatttttactgcaagagtctcaacaggaaactacagtaaagcagcttcag
tcgccgcttcctcttcctacaacactccccttgttgtctgcaagtgtcgctgtaacaaaa
actgtaattgctaaccctgtgctatacctgaataatcacatccatgatattctgtacact
attgtacaaatgaagaatcctccccatccggataataaagacccaaaagtggacacactt
catttgttgggagcatctttgtctgcctctatataccaagctttgtgtgacagccatagt
tacagcagccagggagaagcaaatcagtttactggcatggcctaccagggcctactattg
agtgaccgacgaaggctaaggacagaaagcattgaagaacatgccacaccaaattcaact
ccagcatcatggccaggtgttagctctcttataaacctccttacaacagcacaagatgaa
gaccagcctaagctgaacattttgctgtgtgaagctgttgtagctgtatatgtgagcctt
ttgacccatgctcttgcaactgactcctgtagtcaaatgttccggctggcagctcatcca
ttgaatagtcgaatgtgggcagctgtttttgggggtggtgttaagcttgttgtgaaacca
agaaaaccaccagaaagtgttccagccatccctgccctctctgaagaaatagataaacat
cgacgaaggtttaacatgcgaatgcttgtgcctggtcgaccagtaaaagatgttgctgtc
ccaccaccagttcccacagaaaggccgacatacaaagagaaatttattcctcccgagttg
agcatgtgggattactttgttgccaagcctttcctccccctatctgacagcggtgtcatt
tatgactcagatgaaagtatcccaagtgatgaggaggaagatgacgatgcatttctttca
gacactcagttacaggagcacacaaactctagctcctacagctggacactaatacgcttg
gcaatggtgaaacttgcaatccacaatcttaagcagttctttcccacagctggccttgaa
ttctctgatctccctgtaacatcaccattgggcattgctgttgtaaaaaacctagaaaac
tgggagcagatacttcaagagaggatggacgaatttgaaggccccccaccaaactatata
aatatatatcctagtgaactagctgcaggagcgggacctgctgccttacgtctcaaggct
ttattagatgctgaaaatacaccttttaagtccaaagattactctgcatttccactacga
aggctttggcactttcttgtgaaacaggagcttctccaggactcatttataagatatgcc
tttaccaagaaaagaaagcaaagtgaggttgaagcagatcttggttatccaggaggaaaa
gcaaaaataattcacaaagagtctgatattattatggcttttgcagttaacaaggcaaac
aacaatgagattgtcttggcttccactcatgatgtacaagagctagatgtatcaagtctc
ctggcagcccagccgtacatatggattggagaagaatatgacagagaatctaaaagctca
gatgacctcgattttagaggttctctgtctgctattcctcagtcaaatgtggcttccttc
agccttagccagatgcaatcctcttcatccatgccttggctaggtagcgggcagacagcc
actggagctggagtgatcataaagagaaatttaaataatgtgaaaagaatggcctcacat
cctgtccaccagtattatcttaccggtgctcaggatggcagtgtgcgcatgtttgaatgg
agtcgtccccaacagcttgtctgcttccgacaggctggaaatgcacgcgttacaagattg
tattttaatgctcaggggaataagtgtggtgttgctgatggtgaaggatttttaagtatc
tggcaagtaaaccagaatgtaacaagtccaaaaccttatctgaactggcagtgtcatact
aaaacaacaagtgacttttcattcataacatcatcaagcttagttgctacagctggacaa
tccagtgacaacaggaatgtttgcctatgggatacattaatatcacctaataacagtctt
gttcatgcatttaattgccatgagaatggtgcaacagttcttcagtacgcaaccaaacag
cagctcttgattactggtggaaggaaaggtggaatctgcatctttgacattaggcagagg
caaatacttcattccttccaggctcatgattctgcaattaaagcccttgctctggattta
tctgaggagtattttgttactggttccgcagaaggtaacatgaaggtgtggaagttaaca
ggccatggtttaattcattcattcaaaaacgagcatgcaaagcagtcaatattccgtaac
attggtgctggcgttatgcagatcgaagtaggagaaaacaagcgcatcttctcctgtgga
gcagatggcactttgaaaatgaggatgatgcccgctgccttgaagacacagtctggtatt
tttgacatcctctaa
DBGET
integrated database retrieval system
