| Entry |
|
|---|
| Symbol |
ddx56
|
|---|
| Name |
(RefSeq) probable ATP-dependent RNA helicase DDX56
|
|---|
| KO |
|
|---|
| Organism |
xtr Xenopus tropicalis (tropical clawed frog)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:xtr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:xtr03009]
100145707 (ddx56)
Enzymes [BR:xtr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100145707 (ddx56)
Ribosome biogenesis [BR:xtr03009]
Eukaryotic type
Pre-60S particles
Helicases
100145707 (ddx56)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
3:126421949..126439204
|
|---|
| AA seq |
552 aa
MAALQFHELGLDDRLLKSIADLGWAKPTLIQEKAIPLALEGKDLLARARTGSGKTAAYSI
PIIQNLLQAKMTVSEQAIRVLILVPTKELGQQVQQMIRQLTVYCARDIKVADISGQADIS
AQRPILMEKPDIVVGTPSRVLTHMTQQTICVRDTLQALVIDEADLVFSFGFEEDLKNLLC
QLPKIFQSFLMSATFSEDVQALKELVLHNPVTLKLEESQFPDSSQLTQFHIQCEEEDKFL
LLYTLLKLSLIRGKTIIFVNEVDRSYRLKLFLEQFSIPACVLNSELPIHSRCHIISQFNQ
GFYDYIIATDEHSLADPSVKGRRGEGKKKGGKGQKGQDKEYGVSRGIDFQNVSTVLNFDF
PQSVDSYIHRAGRTARANNPGVALTFVAHTELPLLSEVEEALGGGVPDEHVLKPYRFCME
EVEGFRYRCRDAMRSVTKQAIKEARLKEIKEELLNSEKLKTYFEDNPRDFQLLRHDKPLH
PAIVKPHLKNVPEYLIPPALRAVADIHNRKRKRRKLKAGNLGFQGTRSKFQRGQNPLRSF
KYAKSKRRRKPE |
|---|
| NT seq |
1659 nt +upstreamnt +downstreamnt
atggctgccctgcagttccacgaattgggactagacgaccggcttctgaagtctatagca
gatttaggatgggccaagccaactttgatccaggagaaagctataccattggcactggag
gggaaggacctgcttgcccgtgccaggacaggatctgggaagacagctgcctattctatt
cctattatccagaatcttcttcaggcaaaaatgacagtgtcagaacaggccattcgggtt
ttgattttggttcccactaaagagcttggtcagcaggttcagcagatgatccgacagctg
actgtgtattgtgcacgtgatattaaagttgccgatatttctggccaggctgacatctct
gctcagagaccaatcctaatggagaaacctgacattgtagttgggactccttccagagtg
ctgacccacatgacccagcagacaatctgtgtgcgcgatactttgcaggcactggtgata
gatgaggctgaccttgtcttttcttttggctttgaggaagatttaaaaaacttgctttgc
cagctaccgaagatattccagtctttccttatgtctgctacattcagtgaggatgttcag
gctctgaaagaacttgtcctgcacaatcctgtgaccctgaaactggaggagtctcagttc
cctgactcgtcccagctcacccagttccacatccagtgtgaggaagaggacaagttccta
ctgctctacactttgctaaaactctcgcttattcgagggaaaaccatcatctttgtgaat
gaggtggatagaagctatcgtctcaagctcttcctagagcagttcagtatcccagcctgt
gtcctaaactctgagctcccaattcattcacggtgtcacattatcagtcagtttaaccaa
ggattctacgattatattattgcaactgatgagcactctctagcggatccctctgtgaaa
ggaaggaggggagagggaaagaaaaaaggaggaaaaggacaaaaaggccaagataaagag
tatggtgtatcccggggcatcgatttccagaacgtgtccacagtactgaactttgatttt
ccccagtctgttgattcctatatacatcgtgcaggcagaacggctcgtgctaacaatcct
ggagttgctcttacctttgtggcacacaccgagctcccccttctgtctgaggttgaggag
gcactaggtggtggtgtgcctgatgaacatgtactgaagccgtaccgtttctgcatggag
gaggttgagggttttcgctaccgttgccgggatgcaatgcggtcagtaaccaaacaagcc
attaaagaagcacgactaaaagagattaaggaggagctgctcaattcagagaaacttaag
acatattttgaggataacccccgggacttccaacttttgcgccatgacaagcccttgcac
cctgcaattgttaaacctcacctgaagaatgtcccagagtacctcattcccccagccctg
cgtgcagttgccgatatccataacaggaaaaggaagaggagaaagcttaaagctggaaat
ttaggattccaggggacaaggtcaaagtttcaaaggggacagaacccactgcgcagcttc
aaatatgcaaagagcaaaaggaggagaaaacctgagtaa |
|---|
