Xenopus tropicalis (tropical clawed frog): 100145718
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Entry
100145718 CDS
T01011
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100145718 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100145718 (dis3)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100145718 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_S1
Rrp44_CSD1
CSD2
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
100145718
NCBI-ProteinID:
NP_001120564
Xenbase:
XB-GENE-5925331
UniProt:
B1WAW3
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All DBs
Position
2:127264310..127287098
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AA seq
951 aa
AA seq
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MLKSKTFMKKTRSGGILKIVREHYLRDDITCGCKGCDECQQERAILELEPILESSLCTTA
HYLLPDTNVLLHQIDILEDPILKNVILLQTVLQEVRSRSAPVYKRIKDLLHNPDKCFYAF
TNEHHRETYLEQEQGENANDRNDRAIRTATKWYNKHLKKSPKMADVQVILITNDRRNKEK
AVEEGIVAYTCEEYIKSLTANPELVDRLACVNDEKNEVESGRLIFAEHLPLSKLQQGIKS
GAYLQGTFRASRDNYLEATVWVHGDSAENKEIIVQGLRNLNRAMHEDIVAVQLLDKENWV
TMSSVVLQDEGDSDDIESVEEKEKMLKTAVNSVKKPSGQVVGIIKRNWRPYCGMLSKSQI
KESTRHLFTPAERRIPRIRIETRQASTLEGQRIIVAVDGWPRNSRYPNGHFVKSLGTAGD
KETETEVLLLEHDVPHQPFSQAVLSFLPKMPWTITPEDMKNRIDLRHLYVCSVDPPGCTD
IDDALHCRELENGTLEVGVHIADVSHFIRPGNALDQESSNRGTTVYLCDKRIDMVPELLS
SNLCSLRSNVDRLAFSCIWEVDENANILNTKFTKSVINSKASLTYAEAQMRIDSPNMNDE
ITQSLRLLNKLAKILKKRRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMVEE
FMLLANISVAQKIYDEFSEYALLRKHPSPPPANYDILVKAAKSKNLDIKTDSAKALADSL
DKAESPGFPYMNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIRRYADI
IVHRLLAVAVGADSTYPDLTDKHKIADICKNINFRHKMAQYSQRASVAFHTQLFFKNRGI
VNEEGFILFVRKNAIVVLIPKFGLEGTVFFEEKDKKKTNLVFNDEVPFLKVENTTFHMFD
KVKVKISLDASNIQHQKIRMALVEPEIPGVTSHEDIATNTNGEPVPKKSKS
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtcaaaaacgtttatgaagaaaacccgttctggtggcattttaaagattgtc
agagaacattatctgcgtgatgatattacctgcggttgcaaaggatgtgacgagtgccag
caggagagagcaatcttggagcttgagcccattttagagagctcactttgcacaacagcg
cactatttgctaccagacaccaatgtactactccatcagattgatatccttgaggacccc
atccttaaaaatgtgattttactgcagactgttctacaggaagtaaggagtcgtagtgct
ccagtttacaaaagaattaaagatctcttacacaatcctgataagtgtttctatgcattc
accaatgagcatcatagagaaacctacttagaacaggagcagggagaaaatgcaaatgat
cgcaatgacagagccattagaactgcgactaaatggtacaataagcacttaaaaaaatct
ccaaaaatggctgatgtccaggtgattttaataacaaatgacagacgaaacaaagagaag
gcagtggaagaaggaattgtggcatatacatgtgaagaatacattaaaagtttgactgct
aaccctgaacttgttgaccgacttgcctgtgttaatgatgaaaagaatgaagtagaaagt
ggaaggttaatttttgccgaacaccttccgttgtcaaagttgcaacaaggtataaagtct
ggtgcatacctgcaaggaaccttccgtgcaagcagggacaactacctggaggccacagta
tgggttcatggggattcagcagaaaacaaagagatcattgtacaaggactgaggaattta
aacagagccatgcatgaagatattgtcgctgtgcagttgctggacaaagagaactgggtg
actatgtcatctgtcgtactgcaggatgaaggtgatagtgatgatattgagtctgtagag
gaaaaagaaaaaatgctgaagactgctgttaatagcgtaaaaaaaccttctggacaagta
gtggggattataaagaggaactggagaccatattgcggcatgctgtccaaatcacagatt
aaggagtccacgaggcatttattcacgcctgcagaaaggagaataccacgaatccgtata
gagacaagacaggcgtctactttagaaggacagaggatcattgttgctgttgacggctgg
cctaggaactccagatatcctaatggacactttgtaaagagcctgggaactgctggtgat
aaagaaacagagacagaagtgttactcctggaacatgatgttcctcaccaaccattctcc
caggctgttctcagttttcttcccaaaatgccgtggaccatcacaccagaggatatgaag
aacagaattgatctgaggcatctttacgtgtgcagtgttgatcctcctggctgcactgat
attgatgatgcactacattgtagagagttggaaaatggaactttagaggtcggagtccac
atcgcagatgtcagccattttattaggcctggaaatgctctggaccaggaatcttctaac
agaggaacaactgtatatctctgtgacaaaagaattgacatggttccagaactgctgagc
tcaaatctctgttcgttaaggtctaacgtagacagattggcattttcctgtatttgggaa
gtggatgaaaacgctaatattttaaatacaaagtttactaaaagtgtcattaattcaaag
gcttcccttacatatgcagaagcacagatgagaattgattcaccaaacatgaacgatgag
atcactcagagtcttcgattgctaaataaactagctaagattttgaagaaacggcgaata
gataatggtgctttaacgctgtcttcgcctgaggttcgattccacatggacagtgaaacc
catgatcccatagacctgcaaactaaggaactgaaggaaaccaattctatggttgaagaa
ttcatgttgttggccaatatttctgtggcacagaagatttacgatgagttctcagaatat
gccctgcttcgcaaacatccatctcctcctcctgctaattatgatattctggttaaagca
gccaaatctaagaatttggacattaagactgactctgccaaagctctagctgattcttta
gacaaagctgaatcaccggggtttccttacatgaacactctattgagaattctggctaca
cgatgcatgatgcaggcagtttatttctgctctggaatggataacgatttccatcactat
ggtctagcttctcctatttacacccacttcacttctcccatcagaaggtatgctgatatt
atagtacatagacttcttgctgtagccgtgggagctgattccacttacccagatcttaca
gacaaacacaaaatagcagacatctgcaaaaatatcaacttccggcataaaatggcgcag
tattcgcaaagggcatctgttgcgtttcatactcagttgtttttcaaaaacagaggaata
gtaaatgaagagggctttatcctctttgttcgaaagaatgcaatagtggttctaattcca
aaatttggcttggaaggaacagtcttttttgaagaaaaggacaagaaaaaaacaaatttg
gttttcaatgatgaggttccctttttgaaagtagaaaatacaacttttcatatgtttgac
aaagtaaaagtaaaaatctcattagatgcatccaacatccagcatcagaagatccgcatg
gctcttgttgaacccgagatacctggagtgacatcacatgaagatattgcaacaaacaca
aatggggagccagttcccaaaaagagtaaatcataa
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