Xenopus tropicalis (tropical clawed frog): 100145775
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Entry
100145775 CDS
T01011
Symbol
carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X5
KO
K20493
leucine-rich repeat-containing protein 16
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100145775 (carmil1)
Membrane trafficking [BR:
xtr04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
100145775 (carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
LRR_Zer-1
Spectrin_5
IL34
Motif
Other DBs
NCBI-GeneID:
100145775
NCBI-ProteinID:
XP_012820837
Xenbase:
XB-GENE-988355
UniProt:
A0A8J0SQN2
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All DBs
Position
6:complement(96408441..96571567)
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AA seq
1392 aa
AA seq
DB search
MTEDSSEVPRELLESIRDVIGRKIKIAVRKKVKLELKGDRVENKVLVLASCRAFILTARV
PTKLELTFSYLEIQGMICSKPGHLMVETEKCNLSMKMSSSEDVNEVVAHIGTCLRKIFPG
LSPVKIIKKVTMEPPDRLANLQALWDSQTVTEVGPCGGFSQMYACVCDWLGLPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSTKDLKLSADVCEQILR
VVSKSSRLEELVLENAGLRIDFAQKLSSALAHNPNSGLHTINLASNPLEDRGVHCLSIPF
AKLPKGLKHLNLSRTSLSPKGVNSLSQSLSANQTIASSLTHLDLSGNVLRGDDLSYLYNF
LAQPNAIVYLDLSNTECAIDMVCAALLRGGLQHLAMLNLSRTVFSHRKGKEISPSIKQFF
SSSLALTHINLSGTKLSSEPLKALLLGLACNPNLKEVSLDLSNCELRSAGAQVLEGCIAE
IHNISSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLIPVLDNLVHMIQ
DEESPLQSLSLADSKLKTDVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDISVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQSIVTSTTQQMIDRICVKVQDHLNSLRNCGVDFVIEDVKSA
ERIMRDAKNSKTLLPNLYHLGGAAWAGANSLPIPIQETLESMAGEVTRVVDEQLKDLLES
MVDAAENLCPNVMKKSNIREDLIQASTEKISIPRNFVKNVLLEQSGIDILNKISEVKLTV
ASFLSDRIVDEILDALSTSHHKLADHLTKRGKPLLHQDSMEIEPAEERPTKRSTITIEDF
SEMDRLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDRALVDVPIHIEDPPYPSS
RPDKRTSGGMAELPSEEGKKLEHFTKLRPKRMKKQQPSKSTQLGAEAPTDGEQNGLMARV
DEGVDEFFSKKVTKMESKKHSFKSLESQDGGEWEEKKRRESRKSGFLNLIKPRSKSERSQ
TVIITEEPSSPKAPLKSPAPDTAKKEKVAESNGTVSSSASAGSSTERSEEVKTPDSLEEN
LDDLTKSERTDSKSSPQSGRRYGVQVMGSGLLAEMKAKQEKRAATKKLGNDVGSKDVSDG
LIITEKLEGSGAVPKFHQPSTESRFPLGRGECAALTADKNLKSEVKPDGSVRSKSSSSTP
TSPKPPLQSTKPALTARPSVPQKPRSSSRTDDVPESPSGLCSPKSALIPPMLKRVPSDKE
RDGQMSTSAAAKPLLEEAARPPSSSEVSPKKGQSQTPTEGPEQKPKALSKEGQQRSKSCD
SGEEVDKEFVFI
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagacagctcagaggtccccagagagttgctagaaagcatccgggatgtaatt
ggaagaaagattaagattgcggtgaggaagaaagtgaaacttgagctcaagggagataga
gttgaaaataaagttctggttcttgcatcatgtcgcgcttttatcctgacagcacgggtt
cctacaaagcttgaactaaccttcagttatttggaaattcaagggatgatttgcagtaaa
cctggccatctgatggttgaaactgagaaatgcaacttgtcgatgaagatgtcttcctca
gaagatgttaatgaagtagtagcccatataggcacatgtctacgaaagatatttccagga
ttgtcgccagtaaaaattataaagaaggtaaccatggaaccaccagacagactagcaaat
ctgcaggctctgtgggacagccagactgtgacagaagtaggcccgtgtggagggttttcc
cagatgtatgcttgtgtctgtgactggctagggttgccgtacagagaagaagtgcagtgg
gatgtggacacaatatatttaacacaagataccagggagttaaacttgcaagacttcagc
catctcgatcacagagatttaataccaatcgttgctgccctggaatacaatcaatggttt
acaaaactatcaacaaaggatctgaaactgtctgctgatgtctgtgaacagattctgcgg
gtggttagcaagtccagccggttggaagaattggttctagaaaacgcggggcttagaata
gattttgcacagaagctgtccagtgcccttgcacacaatccaaactcaggacttcatact
attaatcttgcaagcaacccccttgaggatagaggtgtgcattgcttaagtattcctttt
gccaaacttcctaagggactgaaacatttaaacttatctagaacctcattatcacctaaa
ggggtgaatagcctctcccagtcactaagtgctaaccagacgattgcaagcagcctcacc
caccttgacctctcagggaatgttctgcgtggggatgacctttcttacctgtacaatttt
ttagctcagccaaatgccattgtatacctggatttatcaaacaccgaatgtgccatcgac
atggtatgtgcagctcttcttcgtggtggcctgcagcatcttgctatgcttaatctatca
agaacagttttttctcacagaaaaggaaaggaaatctcaccatcaatcaagcaatttttc
agcagctcacttgctctgacacacataaacctttcaggcaccaagctatcctcggaaccc
ctaaaggctctgttacttgggctggcatgcaaccctaatctgaaggaggtgtctctagat
ctcagcaactgcgagttaagatcagcaggagctcaggttttagaaggctgcatagcagaa
attcataacatttcaagtcttgatatttctgacaatggtttagaatctgacctctcaact
cttgttgtctggctcagtaaaaatcgatcaataaggcatctggctttaggaaagaatttc
aacaacatgaaatctaaaaacttgatccctgtccttgacaatttggtacatatgatacaa
gatgaagaatcgcctttgcagtcactctctttggctgactctaaattgaagacagatgtc
acaattatcataaatgcccttggcagcaatacgtccctgaccaaagtagatattagtgga
aatggcatgggggatatgggagccaaaatgttggccaaagctttgcagataaataccaag
ctaagaacggtaatctgggacaagaataatatcactgcacagggattccaggatatttca
gtagctttagaaaagaactataccctgaggtttatgcccatacctatgaatgatgcttcc
caggctctgaagactaatccagaaaagacagaagaagccctacaaaagatagaaaactat
ttgctgcgaaatcatgaaacaaggaagtacctacaggaacaagcatatcgactgcaacaa
agtattgttactagcaccacacaacagatgattgacagaatatgtgtcaaagttcaagat
cacctgaactccttgagaaattgcggggtcgattttgtgattgaagacgtgaagtccgca
gaaagaataatgcgagatgcaaagaattcaaaaactcttttgccaaacctttaccatctt
ggtggtgcagcatgggctggagccaacagtttacccattccaattcaagaaacactggaa
tctatggctggagaggtcaccagagtcgtagatgaacagctgaaggaccttctggaatca
atggttgatgcagccgagaatctgtgtccaaatgttatgaaaaagtccaatatccgtgaa
gacctcattcaagcaagcactgagaaaatatccattcctcgaaattttgtaaaaaatgtt
ttgcttgagcaatctggaatagacatcctaaacaaaataagtgaagtgaaactgaccgta
gcatcattcctttctgaccggattgttgatgaaatcctagatgcgctttcaactagccat
cataaattggctgatcatctgaccaagcgtggcaagcctcttctacatcaagattccatg
gaaattgaacctgctgaagaaaggccaaccaagcgatccactattacaatagaggatttt
agtgagatggaccgtctagaggatttagatacatgtatgatgacgcccaagtcaaagaga
aagagcattcacagcagaatgctgcgcccagtatctcgagcttttgagatggaatttgat
ttggacagagctctggtggatgtcccaatacatatcgaggaccctccctacccatccagc
aggccagacaaacggacatctggtgggatggcagagttaccctctgaagaaggcaaaaaa
ttagaacatttcacaaaactgcgtcctaaaaggatgaagaagcagcaaccaagcaaatcc
acacagcttggtgctgaagctcctacagatggtgagcagaatgggctcatggccagggta
gatgaaggtgtagatgagttcttcagcaagaaagtcactaaaatggagtctaagaaacac
tcttttaaaagtttagaatctcaagatggtggtgagtgggaagaaaaaaagagaagagaa
tctagaaagagtggctttcttaacttaatcaaacctagatctaagtcagaacgatcacag
actgtgattattacagaggagccctcttcacccaaggccccacttaaaagtcctgctcct
gatacagcaaaaaaagagaaagtggcagagagcaacgggacagtgagctccagtgccagt
gccggcagcagcaccgagagatcagaagaggtgaaaacgcctgactctctggaggagaac
ctcgacgatcttacaaagtccgaacgaactgacagcaagagcagtccacaatcaggaagg
cggtatggagtccaagtgatggggagtgggctgctagctgagatgaaagctaagcaggaa
aaaagagcggctactaagaaattaggaaacgatgttggcagcaaagatgtgtcagatggt
ctgattataacagaaaaactagaagggagcggagcagttcccaaattccatcagccttcc
acggagagccgctttcctttaggtagaggagaatgtgctgccttaacagcagacaaaaac
ttgaaaagtgaagtgaagccagatggcagtgtaaggtccaagagttcttccagtactcca
accagcccaaagccaccacttcagtccacaaaacccgccctgacggcacgtccttctgta
cctcagaagcccaggagcagctctcgcactgatgatgtaccagaatccccatctgggctg
tgctccccaaaatcagcccttatccctccaatgctgaagagagttccgtcagacaaggag
agagatgggcagatgagcacttctgctgctgcgaaaccgttgctagaggaagcagcgcgc
ccaccttcctcatcagaagtatcgccaaaaaagggtcagagccaaactccaacagagggt
ccagagcagaaacccaaggccttaagcaaagaaggtcagcagcgaagcaaatcctgcgat
tcgggagaggaagttgataaagagtttgtttttatataa
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