Xenopus tropicalis (tropical clawed frog): 100145778
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Entry
100145778 CDS
T01011
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100145778 (usb1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
100145778 (usb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
100145778
NCBI-ProteinID:
NP_001120615
Xenbase:
XB-GENE-948670
UniProt:
B1WBH1
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Position
4:complement(76324921..76338258)
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AA seq
250 aa
AA seq
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MALVSYSSSEDDEGETTEPPGRFLPPLPPPTTVLRMFQDREDDEGLDDRTKHGGRIRSFT
HERGNWATYVYIPFQPQDEFLDLVDELLSVAAEHGVFLTKMSEFHISQSQTVVLRHHWIN
PFIESLKDKLHCMYRFLCIADRIKVYTNQEKTRTFLGLEVSVGSEHLLEVVSEVDQSLKE
FNLQTFYEEPSFHMSLAWCVGDKAGKLEGSCLVELQKVIDRFEDSDILTRFNAEEIRCKA
GNKTFCIPLL
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggctttggtgagttacagcagttcagaagacgatgagggtgaaacaactgagccacca
ggaagatttcttcctcctctcccccctccaacaactgtattaaggatgttccaagatagg
gaggatgatgagggacttgatgacaggacaaaacatggaggaagaattcgcagcttcaca
catgagcgaggcaactgggccacctatgtctatataccttttcagccacaagatgagttt
ttggatttggtggatgaacttctgtctgtagctgcagagcatggagtcttcttgaccaaa
atgagtgagttccatatcagccagtcacaaacagttgtccttcgacatcactggatcaat
ccattcatagaatcgctcaaggataagctgcactgcatgtacagatttctgtgcattgct
gatcggatcaaggtttacaccaatcaggagaaaaccagaacattcctggggctagaggtc
agcgtggggtcggaacatcttttagaagttgtgtcagaagtggaccagtccttgaaggaa
ttcaatctgcaaacattctatgaggagccttcctttcatatgagccttgcttggtgtgtg
ggggacaaagctgggaaattagaaggaagttgtctggtagaacttcagaaagtcatcgac
agatttgaggattctgacatactgacacgatttaatgctgaagagattcgctgcaaagct
ggaaacaaaactttttgtatccctctgctataa
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