KEGG   Xenopus tropicalis (tropical clawed frog): 100145792
Entry
100145792         CDS       T01011                                 
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022  Basal transcription factors
xtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100145792 (gtf2h3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100145792 (gtf2h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xtr03021]
    100145792 (gtf2h3)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100145792 (gtf2h3)
Transcription machinery [BR:xtr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100145792 (gtf2h3)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100145792 (gtf2h3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 100145792
NCBI-ProteinID: NP_001120625
Xenbase: XB-GENE-952722
UniProt: B1WBJ1
LinkDB
Position
1:complement(160960244..160976096)
AA seq 200 aa
MIADDIKDLMTKTGQINGQQTETVLAGSLAKALCYINKIAKDTKAGQEVKSRILVIKAAE
DSALQYMNFMNVIFAAQKQSILIDACVLDSDSGLLQQACDITGGIYLKLPQANSLLQYLL
WVFLPDPDQRSHLNLLPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETA
FKISLPPVMKAKKKKLKPMI
NT seq 603 nt   +upstreamnt  +downstreamnt
atgattgcggatgatattaaggatctcatgaccaaaacagggcaaataaacggacagcaa
actgagactgtgttagctggatccttggcaaaagctctctgttatattaacaaaatagcc
aaagatacaaaagcagggcaggaggtgaagtccaggattttggtaatcaaagctgcagaa
gacagtgctttgcagtatatgaattttatgaatgtgatatttgcagcacagaagcagagc
attctcattgatgcctgtgtcttagactctgattctggacttctacagcaggcttgtgac
attactggaggaatttatctaaagctaccacaggccaactctttgttgcagtatttgttg
tgggtgtttcttcctgatccagatcagaggtcccatcttaatctacttcctcctgttcat
gttgattacagagctgcgtgcttttgccatcgaaacctgattgaaattggctatgtgtgc
tctgtgtgcttatcaatattctgtaattttagtcctatctgcaccacttgcgaaactgcc
tttaagatctctttgcctcctgtaatgaaagccaagaaaaagaaattaaaacctatgatt
tag

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