KEGG   Xenopus tropicalis (tropical clawed frog): 100145800
Entry
100145800         CDS       T01011                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100145800 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xtr01009]
    100145800 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100145800 (pnkp)
Enzymes [BR:xtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     100145800 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     100145800 (pnkp)
Protein phosphatases and associated proteins [BR:xtr01009]
 HAD phosphatases
  Other HAD phosphatases
   100145800 (pnkp)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100145800 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase Hydrolase_6 Zeta_toxin LNS2 HAD_PNKP
Other DBs
NCBI-GeneID: 100145800
NCBI-ProteinID: NP_001120633
Xenbase: XB-GENE-5953796
UniProt: B1WBK3
LinkDB
Position
7:complement(117557788..117570983)
AA seq 597 aa
MKCYLRSVDAKHSPIALPDGKGVTLGRGPETLVTDRKCSKTQVELVANLENRAVHVTQLG
ANPCSVGEAVLKKGESILMKEDQTLFLVNRLHPYTVMFKEDSPKPAADTGKINKKSPKNT
ITEPPSTSSKKTITDFFGASTSKGKRRIQHDNTSTGSSNKKPKYQDPKAEAGEEWDDSEE
EEIARKLSHLQETAAKAKPSENPSQVSSTDERGVACSKDSWEEHGKLLLFNKKGVQASSK
IAGFDIDGTIITTKSGRVFPVNADDWKILYPEVPRKLKELLANGYKVIFITNQMGISRGK
LKPEVFKAKVEAILDHLGIPVQVFVATGMGIYRKPVTGMWDHLCNKANDGIEVKKEDCLY
VGDAAGRPANWAPDRKKKDFSCSDRLFALNIGIKFFTPEEFFLGWKKAAFNFPVFDPRTI
NPSGQLYEPPSASLVSPSPEVVVAVGFPGAGKSTFFKEHMIPKGYECANRDTLGTWQKCV
AACEAALKRGKSIVIDNTNPDLESRSRYIDCAKKAGVPARCFLFTATIEEAKHNNRFREM
TYTGKGHVSVNDMVINSYRTKFVEPSASEGFSEILKIHFVPIFKDPELQALHQQFSE
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgaagtgttacttgagaagcgttgatgcaaagcacagtcccattgcccttcctgatggt
aaaggggtcactttaggaagaggaccagaaacccttgtaacagacaggaagtgttctaag
actcaagtggaacttgtggctaatctggagaacagagcagtccatgtaacccagttgggt
gcaaacccttgctcagttggagaagcagtgctgaagaagggagagagcattttaatgaaa
gaagatcagacgctttttttggtgaataggctacatccatatactgtaatgtttaaggaa
gatagtcctaaacctgctgctgacactggaaaaatcaataagaaatcaccaaagaacacc
ataactgaacccccttccacatcatccaagaagacaataacagatttctttggggcctcc
acatccaaaggaaagaggcgcatacagcacgataacacttccactggatcaagcaacaag
aagccaaagtaccaggacccaaaagctgaggctggagaagagtgggatgactcagaagag
gaggaaatagcacgcaaactgtctcacttgcaggaaacggcggctaaagctaagccaagc
gagaacccatctcaggtttcttcaactgatgagagaggagttgcctgtagcaaagattcc
tgggaagaacatgggaagcttcttctctttaacaagaaaggggttcaggccagttctaag
attgctgggtttgatattgacgggacaattataacaacaaagtcaggaagagtcttccct
gtaaacgctgatgattggaaaattttatatccagaggttcccaggaagttaaaagagctt
ctagccaatggctacaaggtgattttcatcacaaatcagatgggaatcagccgtggcaag
ctgaagcctgaagttttcaaagcaaaagtggaagccattttggatcatttggggattcct
gtgcaggtctttgtggctactggtatgggaatctaccgcaaacctgtgactggaatgtgg
gaccatctctgtaacaaggccaatgatgggattgaagtaaagaaggaagactgcctctat
gtaggagatgctgccggccggccggctaattgggcccctgatcgtaagaagaaggacttt
tcttgcagtgaccggctgtttgctctaaatattggcataaagttcttcacaccagaggag
tttttccttggatggaaaaaagctgcctttaatttccctgtcttcgatccgaggaccata
aatcccagtgggcagttatacgaacccccctctgcatcgctggtgtctccctctccagaa
gtagtggtggctgtgggctttcctggagctggaaaatccactttctttaaagaacatatg
attccaaaaggttatgagtgtgccaacagggacaccctgggaacatggcagaagtgtgtg
gcagcctgtgaagctgcactgaagagaggaaagagcattgtcatagacaacaccaaccct
gacttggagtctcggagcaggtacatagactgtgctaaaaaagccggggtaccagcaagg
tgcttcctcttcacagccaccattgaagaagcaaaacacaacaaccggttccgggagatg
acttacactggcaaagggcatgtttctgttaatgacatggttatcaatagctacaggacc
aagtttgttgagccatcggccagtgaaggcttcagtgaaattctgaaaatacattttgtg
cccatttttaaagatccggagctacaggctttgcaccagcagttctcagagtga

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