Xenopus tropicalis (tropical clawed frog): 100158516
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Entry
100158516 CDS
T01011
Symbol
retreg2
Name
(RefSeq) protein FAM134A
KO
K23880
reticulophagy regulator
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100158516 (retreg2)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100158516 (retreg2)
ER-phagy
ER-phagy recepters
100158516 (retreg2)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_RETREG1-3
Reticulon
GATase_5
Motif
Other DBs
NCBI-GeneID:
100158516
NCBI-ProteinID:
NP_001121425
Xenbase:
XB-GENE-5849176
UniProt:
B2GU71
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All DBs
Position
9:complement(83160917..83179038)
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AA seq
484 aa
AA seq
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MQREDAGSWVSGESEERSGRAPGSLEDEMRRLEVHLRLVLHEWGPVLSAAQRLLVWERAL
PSLLTAAALHGLFWLFSYLSPRPVFLLSFFLLLLICVERWKPWLVAHFRAPSRGDPSNDS
ETLSSVAGAGHPRLLSVPELCHYLAESWVTSQQYIQELLQYKKQNPGTFCAVVCSGCAVM
AIIGHYVPGIMISYIILLSVLLWPVVVYRELIQRMYTALEPVLMKLDYTMKGERLHRSHK
KRQGKKEAEQGEELVAETDSESEIELSGFSPEMDVRITALALSITDSELSDEEASILESG
GFSVSRATTPQLTDVSEDLDQQSTVTEEGSAPKESSDLSQWLGQRPTDEKPLFETHSVAH
SQAQSLNLDTEELLPSLTSPLHFVNTHFNGKGQAVGMAVEVQSLREGGTVIPSDLQSPIM
PVATLGHLLSEMQEPGDDGEDFELLEQEEADQMEQELEEDERHRAAGTSATPVCPELEQE
KPVS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagaggacgcggggtcgtgggtgtcgggggagtcggaggagaggagcggccgg
gctcccggatccttagaagatgaaatgaggcgactggaggttcatctgcgccttgtgtta
cacgaatggggccctgtgctctctgctgcccagcgcctcctggtgtgggaacgggccctg
cccagcctgctcactgccgccgccctgcatggcctcttctggctcttctcgtacctgtcc
ccaagacctgtgtttttattaagctttttcctgctgttgcttatttgtgtggaacgctgg
aagccatggctggtggcgcacttcagagcaccatctcggggtgatccttccaatgatagt
gaaaccctgtcatctgtggctggagcagggcacccccgccttctaagtgtgcctgaattg
tgccattacctggcagagagctgggtcacttctcagcagtacatccaggagctgctgcag
tacaagaagcagaatcctggcacgttttgcgctgtggtgtgctctggctgtgcagtaatg
gctatcatcggacattatgtgccagggatcatgatctcctatataatcttgctcagtgtt
ttgttgtggcctgtagtcgtttatcgtgagctgattcagagaatgtatacggcactggaa
ccagtcctcatgaagctggactacaccatgaagggagaaagactacaccgctcacacaag
aagaggcagggaaagaaagaagctgaacaaggtgaagaactggtcgctgaaacagacagt
gaaagtgagattgagctctctggattttctcccgagatggatgtaagaattacagccttg
gctctatccattacggattccgagctgtctgacgaggaagcctccattctagagagtggt
gggttttcagtctctagggcaactacaccccaactgacagacgtgtctgaagatctagac
cagcagagcactgtgacagaggaaggatctgctcccaaagagtccagtgacttgtctcag
tggctggggcagcgcccaactgatgagaagcctttatttgaaactcactctgtggctcac
tcacaagcccagtctcttaacttagatacggaagagctgttgccttcgctaacgtcccct
ttgcactttgtcaacactcacttcaatggaaagggacaagcggtgggaatggcggttgaa
gtccaatcgctaagggagggcggcacagtcattccctccgatttgcaaagccctataatg
ccggttgctactttgggacacctcctttctgaaatgcaagagcctggggatgatggagag
gattttgagttgttggagcaagaggaggcggatcagatggagcaggagctagaggaggac
gagaggcaccgagctgccggaacatcagcaaccccagtctgtcctgaactggaacaagag
aaacctgtttcctag
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