Xenopus tropicalis (tropical clawed frog): 100158518
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Entry
100158518 CDS
T01011
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100158518 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100158518 (sfpq)
03041 Spliceosome [BR:
xtr03041
]
100158518 (sfpq)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100158518 (sfpq)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100158518 (sfpq)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100158518 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
100158518
NCBI-ProteinID:
NP_001121427
Xenbase:
XB-GENE-5968416
UniProt:
B2GU75
LinkDB
All DBs
Position
2:82237588..82274643
Genome browser
AA seq
659 aa
AA seq
DB search
MPRDRFRNRGGGGGGMSIYRRGNGGRGGGMPNYRGSGYMDSNRGPHQNQQQGPPQQKQQQ
DKQPAQQQQKQTPAPEQKPAQQPQAATKPQDSQAPQPPAQSPQSKPAPSPQQKPGTTPQQ
QQSQPQSSPAKPVPQTPPQQLQKPPQQPQQQKPAPPNNASSQAKPGQPPVHHHQQQQQRS
RPGMNQVGQKRPHQSRFQSQPPPHAMESDAAEEKSSADDVSGWSDGVRATLSLLKRPGEK
TYTQRCRLFVGNLPTDINDDEFKKLFEKYGEPGEVFINKSKGFGFIKLETRALAEIAKAE
LDDLPMRGRQLRVRFATHSAALSVRNLSPFVSNELLEEAFSQFGPVERAVVIVDDRGRST
GKGIVEFAAKPAARKALERCTDGVFLLTTTPMPVIVEPLEQFDDEDGLPEKLAQKNHLYQ
KEREVPPRFAQHGTFEFEYSQRWKSLDEMEKQQRAQVEKNMKEAKEKLESEMEDAYHEHQ
ANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMLLRQREMEEQMRR
QREEGYRMSYMDPRERDMRMGASQMSMADPYGAASQKYPPLGGAGMGYENSPGVAQATIS
SSIMGGDMRNERFVQGNAGTPNAQASRGIGTVPPTAAAGAGGYGRGREEYEGPNKKPRF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgatcgatttaggaaccgcggtggtggaggaggtggaatgagtatctatcgt
cgcggaaacggtggccgcggaggagggatgccaaattaccggggatcgggatacatggat
tctaaccggggcccccatcaaaatcagcagcagggtcctccgcagcaaaaacagcaacaa
gacaagcagcccgcccaacagcagcaaaaacagactcctgctccagagcagaaacccgca
caacagccacaggctgcaaccaagccccaggattcccaggctcctcagcccccggcccag
tccccacagtccaagcccgccccgtccccacagcagaaaccgggcaccactccccagcag
caacaaagccaacctcagtccagccctgctaaaccagtgccccagacaccgccccagcaa
ctacagaagccgccccagcagccacagcagcagaaacccgcgcctcctaataatgcttct
tcacaggccaaacctgggcaaccccctgtccaccatcaccaacagcagcagcagaggtct
aggcctggaatgaaccaagtcggacaaaagaggccgcatcagtcccgcttccagtctcag
cccccgccccatgccatggagtcggatgccgctgaggagaaatcaagcgcagacgatgtc
tccggatggagcgatggtgtaagggctacactttcacttctgaaaaggccaggagagaag
acctacactcagcgctgcaggctgtttgttggcaatctcccaactgatataaacgacgat
gaatttaagaaactgtttgaaaaatatggggagccaggggaggtgttcattaacaaaagt
aaaggcttcggctttattaaactggaaactagagcattagcagaaatagctaaagcagag
cttgatgacttaccaatgcgaggaaggcaactacgtgtgcggtttgcaacacattcagct
gcactctctgttcgcaatctatctccatttgtttctaatgagctactggaagaagccttt
agtcagtttggaccagtggagcgagctgtagttatcgtggatgatcgagggaggtcaacg
ggaaaaggaatagttgagtttgcagcaaaaccagcagccagaaaggcacttgaaagatgc
actgatggagtttttcttctgaccactaccccaatgccagttattgttgagccccttgaa
caatttgatgatgaagatgggctgcctgagaaacttgcacagaagaatcacctttaccaa
aaggagagagaggttccaccaagatttgcccaacatggaacttttgagtttgagtattct
cagaggtggaaatctttggatgagatggagaaacagcaaagggcacaggtagagaaaaac
atgaaagaggcaaaagaaaagcttgaaagtgagatggaagatgcatatcatgagcatcaa
gctaatctcttgcgtcaagatttaatgaggcgtcaagaagaactcaggcgcatggaagag
cttcacaatcaagaaatgcagaagcgcaaagaaatgcaacttaggcaagaggaggaacgg
cgcaggagagaggaagaaatgttgctccgccagagagaaatggaagaacagatgaggcgc
cagagagaagagggttatcgtatgagttacatggacccacgggaacgagatatgcgcatg
ggagcaagtcagatgtccatggcagatccctatggtgctgcaagccaaaagtatccaccg
cttggaggagctggtatgggctatgaaaacagccctggggtagcacaagctaccatcagc
tcatcaattatgggaggagacatgcgcaatgagcgctttgtccaggggaatgcagggact
cctaatgcccaagcttccagagggattggaactgtgccacctactgcagctgcaggggct
ggaggctatgggagggggagggaagaatatgaagggccaaacaaaaagcccaggttctag
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