Xenopus tropicalis (tropical clawed frog): 100158523
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Entry
100158523 CDS
T01011
Symbol
stag1
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100158523 (stag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100158523 (stag1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100158523 (stag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
100158523
NCBI-ProteinID:
NP_001121432
UniProt:
B2GU81
LinkDB
All DBs
Position
5:132273878..132370200
Genome browser
AA seq
1265 aa
AA seq
DB search
MITSELSVLQDSTNETAVVHTDMSAVSTDMSTELVEDLEVKGKRKRGRPGRPPSAIKKPR
KTPADRSRAETGSRGRGRANGHPQQNGEGDPVTLFEVVKMGKSAMQSVVDDWIESYKQDR
DIALLDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPHWKK
FRCNFCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTAL
VNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFK
GIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKA
LQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDC
ENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRSSPNGNLVKMLVLFFL
ESELHEHAAYLVDSLWESSQELLKDWECMTELLVEEPMQGEEVMSERQESALIELMVCTI
RQAAEAHPPVGRGTGKRVLTAKERKTQLDDKNKLTEHFIVALPVLLSKYSADAEKVANLL
QIPQYFDLELYSTGRMEKHLDSLLKQIRFVVEKHIESDVLEACSKTYSILCSEEYTIQNR
VEIAHSQLIDELADRFSHAVEELLQEAEEADEDEIYNVMASLKRLTCFHNAHDLTKWELF
VSCYRLLRAGIEHEGMMEQIVVQALQCSHYSILWQLVKITEGNPSKEEMLTLRKTVKTFL
AVCQQYLSSVTTTVKEQAFMLLCDLLMIFSHQLTTGGRENLVLLVFNPDVGLQSELLNFV
MDHVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMHAAADIFKHY
MKYYNDYGDIIKETLSKTRQMDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIK
ELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGQEYPPLNLAFLEVLSEFSSK
LLRQDKKTVHSYLEKFLTDQMMERREDVWLPLISYRNSLVTGGDEDRLSVNSGGSNSKGS
SVRSKKGRPPLHKKRGIEEESIDNSWVTRNDTMQTPGALTTPQLTSTVLRENPRQLPEQI
PEQESEHSSEPDFLHNPQIQMSWLGQQKLEDLNRKDRTSMSYMKVRSGVRHAVRGLMEDD
AEPIFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGF
GMPMF
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcagagctgtcagtccttcaggactctacaaatgaaactgcagtcgtgcac
acagacatgagtgcagttagcactgatatgagtactgagcttgttgaagatttagaggtg
aaaggaaagaggaaaagaggccgtccaggaaggccaccgtctgcaatcaagaaacccaga
aaaacacctgccgatcgcagccgtgccgaaacaggatcaagaggccgtggaagagcaaat
gggcacccccagcaaaatggagaaggtgaccctgtcaccttgtttgaagtagtgaaaatg
ggaaaaagtgccatgcagtctgtagttgatgactggattgaatcatataaacaggacaga
gacattgctcttctggacttgataaacttctttatccagtgctcaggatgcaaaggtact
gtaagaattgaaatgttcaggaatatgcagaatgcagaaataatccgcaaaatgacagaa
gagtttgatgaggacagtggtgattatcctctcactatgcctggtcctcactggaagaag
tttcgctgcaacttctgtgagttcatcagtgttctgatccggcaatgccaatacagcatc
atttatgacgagtacatgatggacacagtaatttcactgctgacaggtctgtcagactcg
caggtccgagccttcagacatacaagcacactggctgccatgaagctgatgacggcgttg
gtaaatgtggctctgaatctgagcattcaccaggacaacacgcagcggcagtatgaagca
gagaggaacaagatgattggcaagagagccaacgaaaggctggagctgctactgcagaaa
cggaaagagcttcaagaaaatcaagatgaaattgaaaatatgatgaattctattttcaag
ggaatatttgttcaccgatatagagatgcaattgctgaaatcagggcaatctgtattgaa
gaaataggggtctggatgaaaatgtacagtgatgctttcctgaatgacagctatttaaag
tacgttggctggacacttcatgaccggcaaggtgaagtgagattgaagtgtctaaaggcc
ttgcagagtctgtataccaacagagagctgttccccaaattggaactcttcactaacagg
tttaaagaccgaatagtttccatgactctggataaggagtacgatgtcgcagttgaagca
atccgcctcgtcacacttattctacatggaagtgaagaagctttgtcaaatgaagactgt
gaaaatgtttaccaccttgtgtactcagcacaccggcctgtagctgtagcagctggagaa
tttcttcataaaaagttattcagtagacatgatccgcaagctgaggaagccttggccaaa
aggaggggaaggagcagtccaaatggaaaccttgttaagatgttagtcctctttttttta
gaaagtgagttacatgagcatgctgcttacttagtggatagtttgtgggaaagttctcag
gagcttcttaaagactgggaatgtatgacagaactgctggttgaggagcctatgcagggg
gaggaagtgatgtcggagcgtcaagagagtgcattgattgagcttatggtctgcacaatc
agacaggctgcagaagcacaccctcctgtgggcagaggaactggcaaaagggtattaact
gctaaagaaagaaaaactcaactagacgataagaataagctgacagaacatttcattgtt
gcacttccagtactgctttctaagtattccgctgatgcagagaaagtggcaaacctccta
cagatccctcagtattttgatctagagctgtacagcactggtagaatggaaaagcaccta
gacagcctgcttaagcaaattagatttgtggtagaaaagcacatagagtctgatgtgttg
gaagcctgcagtaaaacctacagcattctatgtagcgaagagtacacaattcagaaccgt
gtcgaaattgcacacagccaactgattgatgagcttgctgatcgattctcacatgctgta
gaagaactgctacaggaggcagaggaagcagatgaagacgagatttacaatgttatggcc
tcattgaaacgtttaacatgctttcacaatgctcatgatttgacgaagtgggaacttttt
gtaagctgttaccgattattaagggctggaattgagcatgaaggaatgatggagcagatt
gttgtgcaagctctccagtgctcacactactccattctctggcagctggtgaagatcaca
gagggcaacccttccaaagaggaaatgttgacattgcgaaaaactgtaaaaactttctta
gcagtgtgtcagcaatatctctcaagtgtaactacaactgtgaaagaacaggccttcatg
ctgctctgtgatctccttatgatattcagccatcaattaacaacgggaggcagagagaat
ctggtgctgcttgtttttaatccagatgtgggactgcaatctgagctgctaaattttgtc
atggatcatgtatttattgaccaggatgatgaaaaccagagcatggagggagacgaggag
gacgaagccaataaaattgaggcattgcacaaaagaagaaacctgcttgctgctttctgc
aaacttatcatctatgatattgtagatatgcatgctgctgcagatatcttcaagcactac
atgaagtattacaatgactatggggacattattaaagaaacactaagcaaaacaagacag
atggacaaaatacaatgtgcaaagaccctcatccttagtttgcagcagctattcaatgag
ctggtccaagagcaaggtcccaatcttgacaggacatctgcacatgtcagtggcattaag
gagctggcccgaagatttgcactcacatttggtttggatcagattaaaacaagagaggca
gtggccactttgcacaaagatggaatagagtttgcctttaaatatcaaaatcctaaaggg
caggagtacccccctctgaacttagccttcctggaggtgttaagtgagttttcctcgaag
ctcctgcggcaggacaagaagactgtacattcttacctggaaaagttcctcacagatcaa
atgatggagaggagggaagatgtttggcttcctctcatctcctacagaaactcactggtt
acaggcggagatgaggacagactgtctgtgaatagtggaggaagtaacagcaaaggttct
tcagtaagaagtaagaaaggccgacctcccctacataagaaaagaggtatagaagaggaa
agtattgacaactcctgggtgaccaggaacgatacaatgcagactcctggagcactaaca
acaccacagctaacatcaactgtgctgagggaaaatcctcgtcagttaccagaacagata
cctgagcaggagtcagaacacagctcagaaccagactttttgcataaccctcagattcaa
atgtcctggttgggccaacagaaattagaagatttaaatcgaaaggatagaacgtctatg
agttacatgaaagttaggagtggtgtacgacatgcagtgcgtggtctaatggaggatgac
gcagaaccaatttttgaagatgttatgatgtcatcacgagggcagctagaagacatgaat
gaggagtttgaggacacaatggttattgatcttcctccttcaagaaacaggcgggagaga
gcagagctccggccagatttcttcgattctgcagccatcattgaagatgattcaggattt
ggaatgccaatgttctga
DBGET
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