Xenopus tropicalis (tropical clawed frog): 100158549
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Entry
100158549 CDS
T01011
Symbol
nfix
Name
(RefSeq) nuclear factor 1 X-type
KO
K09171
nuclear factor I/X
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100158549 (nfix)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Other basic domains
NF-1
100158549 (nfix)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTF_NFI
NfI_DNAbd_pre-N
MH1
Motif
Other DBs
NCBI-GeneID:
100158549
NCBI-ProteinID:
NP_001121455
Xenbase:
XB-GENE-992650
UniProt:
B2GUB9
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Position
3:complement(139485306..139623811)
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AA seq
433 aa
AA seq
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MDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIK
QKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWR
LDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVSIKELDLYLAFFVHTPDS
GQSDASNQTEVDIKPPPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATSSGPNFSLADLE
SPSYYNINQVSLGRRSLTSPPSSSSTKRPKSLDDSEMESPVDDVFYPGTGRSPAAGGSQA
SVWPNDVDTGPGSLKKPGKLDFCSALSSQTSSSRMAFTHHPLPVLAGVRPGSPRASASAL
HFPSTSIIQQSSPYFTHPTIRYHHHHHTQDSLKEFVQFVCSDTSGQGSGQHSQRLPPPGP
TGLSQLDHETPTF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttcaccctttcatcgaagctcttctcccacatgtccgcgcattttcgtac
acatggttcaacctccaagcaaggaaacgcaagtatttcaagaagcacgaaaagcggatg
tcaaaggacgaggagagggcggtgaaggatgagttgttgggagagaagcccgagatcaag
cagaagtgggcgtctcgactgttggctaagcttcgtaaggacatccggccagagttccga
gaggactttgtccttactatcaccggcaagaagcctccatgttgtgtcctctctaaccca
gaccagaaagggaagatccggaggattgactgccttcgtcaggcagacaaggtgtggagg
ttggacctggtgatggtcatcctgtttaaggggatcccgctggagagcaccgacggggaa
cgtctctacaagtcaccccaatgctctaacccagggttgtgtgtccagcctcatcacatt
ggggtgtccatcaaagagttggacctctacctggccttcttcgtccacacacccgattct
ggacagtcggacgcttcaaatcagactgaggtggatataaagccccctccaaatggtcac
ctgtcctttcaggattgctttgtcacctcaggagtgtggaacgtcactgagcttgtacgc
gtgtcccagacacctgttgccacatcatctggccccaacttctcattggctgacctggag
agcccaagctattacaatataaaccaggtgtcacttggtaggcggtccttaacgtcgcct
ccttccagcagttctaccaagcgccccaagtctcttgatgacagtgagatggagagtcca
gtggatgatgttttttacccggggacaggtcggtcgcctgcagcaggaggcagccaggcc
agtgtgtggccaaatgatgtagacacagggcctgggtcacttaaaaagccgggaaagctg
gatttctgcagtgctctgtcctcacagaccagttcctctcgaatggcattcacccatcac
cctctcccagtgctggcaggagtgagaccaggaagccctcgggcatcagcgtctgctctt
cacttcccctcaacgtccatcatccagcaatccagtccttacttcacccatccaacaata
cgctatcatcaccatcatcatacccaggactctcttaaagagtttgttcagtttgtctgc
tcagacacctctggccaggggtcaggacagcattctcagcgccttcccccgccgggtcca
acaggtttgtcacaattggatcacgagacaccaactttctga
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